Information for 12-YTVTBMCCTTTCCAAC (Motif 16)

A G C T C G A T T G C A A C G T A G T C G T A C G A T C A G T C A C G T A G C T A C G T G A T C A G T C G T C A G T C A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G C T A G G T C A T C G A C G T A C T A G C T A G C A T G T C A G C G T A A C G T C G T A C T G A
p-value:1e-10
log p-value:-2.440e+01
Information Content per bp:1.704
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif36.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets55.6 +/- 29.6bp
Average Position of motif in Background52.8 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:YTVTBMCCTTTCCAAC
---TGACCTTTNCNT-
 A G C T C G A T T G C A A C G T A G T C G T A C G A T C A G T C A C G T A G C T A C G T G A T C A G T C G T C A G T C A A G T C
A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:YTVTBMCCTTTCCAAC--
--TTGACCTTTTGACCTT
 A G C T C G A T T G C A A C G T A G T C G T A C G A T C A G T C A C G T A G C T A C G T G A T C A G T C G T C A G T C A A G T C A C G T A C G T
A C G T A C G T C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:YTVTBMCCTTTCCAAC-
---TGACCTTTGCCCCA
 A G C T C G A T T G C A A C G T A G T C G T A C G A T C A G T C A C G T A G C T A C G T G A T C A G T C G T C A G T C A A G T C A C G T
A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:YTVTBMCCTTTCCAAC--
---TGACCTTTTGACCTC
 A G C T C G A T T G C A A C G T A G T C G T A C G A T C A G T C A C G T A G C T A C G T G A T C A G T C G T C A G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------YTVTBMCCTTTCCAAC
NNTNANTTCTTATCTCTANANN
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T T G C A A C G T A G T C G T A C G A T C A G T C A C G T A G C T A C G T G A T C A G T C G T C A G T C A A G T C
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A

Rarb/MA0857.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:YTVTBMCCTTTCCAAC---
---TGACCTTTTGACCTTT
 A G C T C G A T T G C A A C G T A G T C G T A C G A T C A G T C A C G T A G C T A C G T G A T C A G T C G T C A G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:YTVTBMCCTTTCCAAC--
---TGACCTTTGCCCTAN
 A G C T C G A T T G C A A C G T A G T C G T A C G A T C A G T C A C G T A G C T A C G T G A T C A G T C G T C A G T C A A G T C A C G T A C G T
A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:YTVTBMCCTTTCCAAC-
---TGACCTTTGCCCTA
 A G C T C G A T T G C A A C G T A G T C G T A C G A T C A G T C A C G T A G C T A C G T G A T C A G T C G T C A G T C A A G T C A C G T
A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:forward strand
Alignment:YTVTBMCCTTTCCAAC
-------TTTTCCA--
 A G C T C G A T T G C A A C G T A G T C G T A C G A T C A G T C A C G T A G C T A C G T G A T C A G T C G T C A G T C A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-YTVTBMCCTTTCCAAC
CCTTTGATCTTT-----
 A C G T A G C T C G A T T G C A A C G T A G T C G T A C G A T C A G T C A C G T A G C T A C G T G A T C A G T C G T C A G T C A A G T C
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T A C G T A C G T A C G T