Information for 3-GTACAGTTAG (Motif 3)

T C A G G A C T T C G A T G A C C G T A A C T G A C G T A G C T C G T A T C A G
Reverse Opposite:
A G T C G C A T C T G A G T C A T G A C G C A T A C T G A G C T C T G A A G T C
p-value:1e-31
log p-value:-7.203e+01
Information Content per bp:1.676
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.46%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets48.8 +/- 27.6bp
Average Position of motif in Background52.3 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTACAGTTAG
BRRCVGTTDN
 T C A G G A C T T C G A T G A C C G T A A C T G A C G T A G C T C G T A T C A G
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTACAGTTAG
TGGCAGTTGG
 T C A G G A C T T C G A T G A C C G T A A C T G A C G T A G C T C G T A T C A G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTACAGTTAG
CCAGGAACAG----
 A C G T A C G T A C G T A C G T T C A G G A C T T C G A T G A C C G T A A C T G A C G T A G C T C G T A T C A G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTACAGTTAG
--GCACTTAA
 T C A G G A C T T C G A T G A C C G T A A C T G A C G T A G C T C G T A T C A G
A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTACAGTTAG---
CACGGCAGTTGGTNN
 A C G T A C G T T C A G G A C T T C G A T G A C C G T A A C T G A C G T A G C T C G T A T C A G A C G T A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTACAGTTAG
--BCMATTAG
 T C A G G A C T T C G A T G A C C G T A A C T G A C G T A G C T C G T A T C A G
A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G

Myb/MA0100.2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTACAGTTAG
TGGCAGTTGN
 T C A G G A C T T C G A T G A C C G T A A C T G A C G T A G C T C G T A T C A G
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTACAGTTAG
-CACAGN---
 T C A G G A C T T C G A T G A C C G T A A C T G A C G T A G C T C G T A T C A G
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTACAGTTAG---
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T T C A G G A C T T C G A T G A C C G T A A C T G A C G T A G C T C G T A T C A G A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

Barhl1/MA0877.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTACAGTTAG-
-NNCAATTANN
 T C A G G A C T T C G A T G A C C G T A A C T G A C G T A G C T C G T A T C A G A C G T
A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C