Information for 18-AAGGMGCTGC (Motif 25)

C T G A C G T A A T C G C T A G G T C A C T A G G T A C A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C T G A G T C A C G T A G T C A T G C A C G T A G C T
p-value:1e-17
log p-value:-4.139e+01
Information Content per bp:1.816
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.06%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets52.5 +/- 23.7bp
Average Position of motif in Background69.1 +/- 5.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAGGMGCTGC-
-AGCAGCTGCT
 C T G A C G T A A T C G C T A G G T C A C T A G G T A C A C G T A C T G A G T C A C G T
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAGGMGCTGC-
-CGCAGCTGCG
 C T G A C G T A A T C G C T A G G T C A C T A G G T A C A C G T A C T G A G T C A C G T
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAGGMGCTGC------
-AGATGCTRCTRCCHT
 C T G A C G T A A T C G C T A G G T C A C T A G G T A C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAGGMGCTGC-
NNAGCAGCTGCT
 A C G T C T G A C G T A A T C G C T A G G T C A C T A G G T A C A C G T A C T G A G T C A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGGMGCTGC------
AATCGCACTGCATTCCG
 A C G T C T G A C G T A A T C G C T A G G T C A C T A G G T A C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAGGMGCTGC-----
CTCAGCAGCTGCTACTG
 A C G T A C G T C T G A C G T A A T C G C T A G G T C A C T A G G T A C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAGGMGCTGC
CAGCAGCTGN
 C T G A C G T A A T C G C T A G G T C A C T A G G T A C A C G T A C T G A G T C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAGGMGCTGC
NNACAGCTGC
 C T G A C G T A A T C G C T A G G T C A C T A G G T A C A C G T A C T G A G T C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

POL002.1_INR/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAGGMGCTGC
--NNNANTGA
 C T G A C G T A A T C G C T A G G T C A C T A G G T A C A C G T A C T G A G T C
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAGGMGCTGC--
-GACAGCTGCAG
 C T G A C G T A A T C G C T A G G T C A C T A G G T A C A C G T A C T G A G T C A C G T A C G T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G