Information for 17-GCGCCTCTGT (Motif 24)

T C A G G T A C T A C G A T G C G A T C C A G T A G T C A C G T A T C G A G C T
Reverse Opposite:
T C G A T A G C C G T A T C A G G T C A C T A G T A C G A T G C A C T G A G T C
p-value:1e-18
log p-value:-4.157e+01
Information Content per bp:1.699
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.57%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets57.1 +/- 23.9bp
Average Position of motif in Background32.6 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCGCCTCTGT
AGGVNCCTTTGT
 A C G T A C G T T C A G G T A C T A C G A T G C G A T C C A G T A G T C A C G T A T C G A G C T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCGCCTCTGT-
---CCTTTGTT
 T C A G G T A C T A C G A T G C G A T C C A G T A G T C A C G T A T C G A G C T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GCGCCTCTGT---
---CCTTTGTTTT
 T C A G G T A C T A C G A T G C G A T C C A G T A G T C A C G T A T C G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GCGCCTCTGT
----CTTTGT
 T C A G G T A C T A C G A T G C G A T C C A G T A G T C A C G T A T C G A G C T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCGCCTCTGT-
---CCWTTGTY
 T C A G G T A C T A C G A T G C G A T C C A G T A G T C A C G T A T C G A G C T A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCGCCTCTGT---
---CCWTTGTYYB
 T C A G G T A C T A C G A T G C G A T C C A G T A G T C A C G T A T C G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCGCCTCTGT--
NNGCACCTTTCTCC
 A C G T A C G T T C A G G T A C T A C G A T G C G A T C C A G T A G T C A C G T A T C G A G C T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCGCCTCTGT---
---YCTTTGTTCC
 T C A G G T A C T A C G A T G C G A T C C A G T A G T C A C G T A T C G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCGCCTCTGT--
--NCCATTGTTC
 T C A G G T A C T A C G A T G C G A T C C A G T A G T C A C G T A T C G A G C T A C G T A C G T
A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

KLF13/MA0657.1/Jaspar

Match Rank:10
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------GCGCCTCTGT-
ATGCCACGCCCCTTTTTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T A C T A C G A T G C G A T C C A G T A G T C A C G T A T C G A G C T A C G T
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G