Information for 3-GCAGGGAGSAAAGMTT (Motif 23)

C A T G T A G C C G T A A T C G A C T G T A C G G C T A A C T G T A G C G T C A C T G A T C G A A T C G T G A C C A G T C A G T
Reverse Opposite:
G T C A G T C A A C T G A T G C A G C T G A C T A C G T A T C G G T A C C A G T A T G C A G T C T A G C G A C T A T C G G T A C
p-value:1e-19
log p-value:-4.439e+01
Information Content per bp:1.637
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets51.6 +/- 26.2bp
Average Position of motif in Background40.3 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCAGGGAGSAAAGMTT
---GGGAGGACNG---
 C A T G T A G C C G T A A T C G A C T G T A C G G C T A A C T G T A G C G T C A C T G A T C G A A T C G T G A C C A G T C A G T
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCAGGGAGSAAAGMTT
---CGGAGC-------
 C A T G T A G C C G T A A T C G A C T G T A C G G C T A A C T G T A G C G T C A C T G A T C G A A T C G T G A C C A G T C A G T
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCAGGGAGSAAAGMTT
GGGCGGGAAGG------
 A C G T C A T G T A G C C G T A A T C G A C T G T A C G G C T A A C T G T A G C G T C A C T G A T C G A A T C G T G A C C A G T C A G T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GCAGGGAGSAAAGMTT
CACAGCAGGGGG--------
 A C G T A C G T A C G T A C G T C A T G T A G C C G T A A T C G A C T G T A C G G C T A A C T G T A G C G T C A C T G A T C G A A T C G T G A C C A G T C A G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGGGAGSAAAGMTT
DCHCAGCAGGRGGCC------
 A C G T A C G T A C G T A C G T A C G T C A T G T A G C C G T A A T C G A C T G T A C G G C T A A C T G T A G C G T C A C T G A T C G A A T C G T G A C C A G T C A G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCAGGGAGSAAAGMTT
-TGGGGA---------
 C A T G T A G C C G T A A T C G A C T G T A C G G C T A A C T G T A G C G T C A C T G A T C G A A T C G T G A C C A G T C A G T
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCAGGGAGSAAAGMTT-
GGAAGGAAGGAAGGAAGG
 A C G T C A T G T A G C C G T A A T C G A C T G T A C G G C T A A C T G T A G C G T C A C T G A T C G A A T C G T G A C C A G T C A G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCAGGGAGSAAAGMTT
ACAGGAAGTG------
 C A T G T A G C C G T A A T C G A C T G T A C G G C T A A C T G T A G C G T C A C T G A T C G A A T C G T G A C C A G T C A G T
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGGAGSAAAGMTT
NNNNGGGGGAAGANGG---
 A C G T A C G T A C G T C A T G T A G C C G T A A T C G A C T G T A C G G C T A A C T G T A G C G T C A C T G A T C G A A T C G T G A C C A G T C A G T
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGGAGSAAAGMTT
NNNTTAGGTAGCNTNT---
 A C G T A C G T A C G T C A T G T A G C C G T A A T C G A C T G T A C G G C T A A C T G T A G C G T C A C T G A T C G A A T C G T G A C C A G T C A G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T A C G T A C G T