Information for 16-GCTCAAGGGG (Motif 22)

A T C G T A G C A C G T T A G C T G C A T C G A C T A G C T A G C T A G T C A G
Reverse Opposite:
A G T C G A T C G A T C G A T C A G C T A C G T A T C G T G C A A T C G T A G C
p-value:1e-19
log p-value:-4.439e+01
Information Content per bp:1.450
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets48.5 +/- 26.7bp
Average Position of motif in Background53.8 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCTCAAGGGG-
AGGTCAAGGTCA
 A C G T A T C G T A G C A C G T T A G C T G C A T C G A C T A G C T A G C T A G T C A G A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PLAG1/MA0163.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCTCAAGGGG-
GGGGCCCAAGGGGG
 A C G T A C G T A C G T A T C G T A G C A C G T T A G C T G C A T C G A C T A G C T A G C T A G T C A G A C G T
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCTCAAGGGG-
AGGTCAAGGTCA
 A C G T A T C G T A G C A C G T T A G C T G C A T C G A C T A G C T A G C T A G T C A G A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTCAAGGGG--
TGCCCTNAGGGCA
 A C G T A T C G T A G C A C G T T A G C T G C A T C G A C T A G C T A G C T A G T C A G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTCAAGGGG--
TGCCCTNAGGGCA
 A C G T A T C G T A G C A C G T T A G C T G C A T C G A C T A G C T A G C T A G T C A G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTCAAGGGG--
TGCCCTGAGGGCA
 A C G T A T C G T A G C A C G T T A G C T G C A T C G A C T A G C T A G C T A G T C A G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTCAAGGGG-
TGCCCNGGGGCA
 A C G T A T C G T A G C A C G T T A G C T G C A T C G A C T A G C T A G C T A G T C A G A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTCAAGGGG-
GTCCCCAGGGGA
 A C G T A T C G T A G C A C G T T A G C T G C A T C G A C T A G C T A G C T A G T C A G A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCTCAAGGGG----
AANTTCAAGTGGCTTN
 A C G T A C G T A T C G T A G C A C G T T A G C T G C A T C G A C T A G C T A G C T A G T C A G A C G T A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCTCAAGGGG-
-NTCAAGTGGN
 A T C G T A G C A C G T T A G C T G C A T C G A C T A G C T A G C T A G T C A G A C G T
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T