Information for 11-GGRCTCTGTGCCT (Motif 21)

A C T G C T A G T C G A T A G C G A C T G A T C A C G T T C A G A C G T A C T G A T G C A G T C G A C T
Reverse Opposite:
C T G A T C A G T A C G G T A C T G C A A G T C C G T A C T A G C T G A A T C G A G C T A G T C T G A C
p-value:1e-20
log p-value:-4.631e+01
Information Content per bp:1.663
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.82%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets52.1 +/- 27.8bp
Average Position of motif in Background58.2 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:GGRCTCTGTGCCT--
-----CTGTTCCTGG
 A C T G C T A G T C G A T A G C G A C T G A T C A C G T T C A G A C G T A C T G A T G C A G T C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGRCTCTGTGCCT-
---GTCTGTGGTTT
 A C T G C T A G T C G A T A G C G A C T G A T C A C G T T C A G A C G T A C T G A T G C A G T C G A C T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGRCTCTGTGCCT-
TGGACTTTGNNCTCN
 A C G T A C T G C T A G T C G A T A G C G A C T G A T C A C G T T C A G A C G T A C T G A T G C A G T C G A C T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGRCTCTGTGCCT--
TGGACTTTGNNCTNTG
 A C G T A C T G C T A G T C G A T A G C G A C T G A T C A C G T T C A G A C G T A C T G A T G C A G T C G A C T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGRCTCTGTGCCT
----GCTGTG---
 A C T G C T A G T C G A T A G C G A C T G A T C A C G T T C A G A C G T A C T G A T G C A G T C G A C T
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGRCTCTGTGCCT
---CTTTGT----
 A C T G C T A G T C G A T A G C G A C T G A T C A C G T T C A G A C G T A C T G A T G C A G T C G A C T
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGRCTCTGTGCCT--
NNGCGTGTGTGCNGCN
 A C G T A C T G C T A G T C G A T A G C G A C T G A T C A C G T T C A G A C G T A C T G A T G C A G T C G A C T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGRCTCTGTGCCT--
NNNNTTGTGTGCTTNN
 A C G T A C T G C T A G T C G A T A G C G A C T G A T C A C G T T C A G A C G T A C T G A T G C A G T C G A C T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGRCTCTGTGCCT-
----GCTGTGGTTT
 A C T G C T A G T C G A T A G C G A C T G A T C A C G T T C A G A C G T A C T G A T G C A G T C G A C T A C G T
A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGRCTCTGTGCCT-
----NNTGTGGTTT
 A C T G C T A G T C G A T A G C G A C T G A T C A C G T T C A G A C G T A C T G A T G C A G T C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T