Information for 15-GGGGCAGATG (Motif 20)

A C T G A T C G C A T G C T A G T G A C C T G A T C A G G C T A C G A T A C T G
Reverse Opposite:
T G A C C G T A C A G T A G T C G A C T A C T G G A T C G T A C T A G C T G A C
p-value:1e-20
log p-value:-4.631e+01
Information Content per bp:1.671
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.82%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets47.1 +/- 28.4bp
Average Position of motif in Background69.1 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GGGGCAGATG------
AAGGCCAGATGGTCCGG
 A C G T A C T G A T C G C A T G C T A G T G A C C T G A T C A G G C T A C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GGGGCAGATG--
--AACAGATGGT
 A C T G A T C G C A T G C T A G T G A C C T G A T C A G G C T A C G A T A C T G A C G T A C G T
A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GGGGCAGATG--
--AACAGATGGC
 A C T G A T C G C A T G C T A G T G A C C T G A T C A G G C T A C G A T A C T G A C G T A C G T
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GGGGCAGATG--
NNVVCAGCTGBN
 A C T G A T C G C A T G C T A G T G A C C T G A T C A G G C T A C G A T A C T G A C G T A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCAGATG--
NGNGACAGCTGCN
 A C G T A C T G A T C G C A T G C T A G T G A C C T G A T C A G G C T A C G A T A C T G A C G T A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GGGGCAGATG--
VNAVCAGCTGGC
 A C T G A T C G C A T G C T A G T G A C C T G A T C A G G C T A C G A T A C T G A C G T A C G T
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GGGGCAGATG---
-SDGCAGGTGCNS
 A C T G A T C G C A T G C T A G T G A C C T G A T C A G G C T A C G A T A C T G A C G T A C G T A C G T
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GGGGCAGATG-----
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C T G A T C G C A T G C T A G T G A C C T G A T C A G G C T A C G A T A C T G A C G T A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GGGGCAGATG---
---GCAGCTGTNN
 A C T G A T C G C A T G C T A G T G A C C T G A T C A G G C T A C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GGGGCAGATG---
--GACAGCTGCAG
 A C T G A T C G C A T G C T A G T G A C C T G A T C A G G C T A C G A T A C T G A C G T A C G T A C G T
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G