Information for 13-TTTSTTTGCT (Motif 17)

C G A T A C G T A C G T A T C G A C G T A C G T A C G T A T C G G T A C A G C T
Reverse Opposite:
C T G A C A T G A T G C G T C A G T C A G T C A T A G C C G T A G T C A C G T A
p-value:1e-21
log p-value:-4.932e+01
Information Content per bp:1.815
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.44%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets55.7 +/- 24.9bp
Average Position of motif in Background58.2 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---TTTSTTTGCT---
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T C G A T A C G T A C G T A T C G A C G T A C G T A C G T A T C G G T A C A G C T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

FOXP1/MA0481.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTTSTTTGCT----
CTTTGTTTACTTTTN
 A C G T C G A T A C G T A C G T A T C G A C G T A C G T A C G T A T C G G T A C A G C T A C G T A C G T A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTTSTTTGCT--
NNNNTTTGTTTACNNT
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T A T C G A C G T A C G T A C G T A T C G G T A C A G C T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

PB0015.1_Foxa2_1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTTSTTTGCT----
NNNTTTGTTTACTTTTN
 A C G T A C G T A C G T C G A T A C G T A C G T A T C G A C G T A C G T A C G T A T C G G T A C A G C T A C G T A C G T A C G T A C G T
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TTTSTTTGCT--
--TRTTTACTTW
 C G A T A C G T A C G T A T C G A C G T A C G T A C G T A T C G G T A C A G C T A C G T A C G T
A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

Foxj3/MA0851.1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTTSTTTGCT----
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T C G A T A C G T A C G T A T C G A C G T A C G T A C G T A T C G G T A C A G C T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTTSTTTGCT----
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T C G A T A C G T A C G T A T C G A C G T A C G T A C G T A T C G G T A C A G C T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTTSTTTGCT---
CCATTGTATGCAAAT
 A C G T A C G T C G A T A C G T A C G T A T C G A C G T A C G T A C G T A T C G G T A C A G C T A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTTSTTTGCT-------
NSTGTTTRCWCAGBNNN
 C G A T A C G T A C G T A T C G A C G T A C G T A C G T A T C G G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTSTTTGCT--
TTTGTTTACTTA
 C G A T A C G T A C G T A T C G A C G T A C G T A C G T A T C G G T A C A G C T A C G T A C G T
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A