Information for 5-CARGCCCAGGAGA (Motif 12)

T G A C C T G A T C A G A C T G T A G C T G A C G T A C C T G A A C T G C A T G C T G A C T A G C T G A
Reverse Opposite:
A G C T A G T C A G C T G T A C A G T C A G C T C A T G A C T G A T C G A G T C A G T C A G C T A C T G
p-value:1e-23
log p-value:-5.479e+01
Information Content per bp:1.711
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.69%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets52.4 +/- 28.4bp
Average Position of motif in Background49.9 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CARGCCCAGGAGA-
CAGGCCNNGGCCNN
 T G A C C T G A T C A G A C T G T A G C T G A C G T A C C T G A A C T G C A T G C T G A C T A G C T G A A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CARGCCCAGGAGA
--TGCCCAGNHW-
 T G A C C T G A T C A G A C T G T A G C T G A C G T A C C T G A A C T G C A T G C T G A C T A G C T G A
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CARGCCCAGGAGA
-AGGCCTAG----
 T G A C C T G A T C A G A C T G T A G C T G A C G T A C C T G A A C T G C A T G C T G A C T A G C T G A
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CARGCCCAGGAGA
-AGGCCTNG----
 T G A C C T G A T C A G A C T G T A G C T G A C G T A C C T G A A C T G C A T G C T G A C T A G C T G A
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CARGCCCAGGAGA-
----NACAGGAAAT
 T G A C C T G A T C A G A C T G T A G C T G A C G T A C C T G A A C T G C A T G C T G A C T A G C T G A A C G T
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CARGCCCAGGAGA
ACATGCCCGGGCAT
 A C G T T G A C C T G A T C A G A C T G T A G C T G A C G T A C C T G A A C T G C A T G C T G A C T A G C T G A
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CARGCCCAGGAGA---
----NDCAGGAARTNN
 T G A C C T G A T C A G A C T G T A G C T G A C G T A C C T G A A C T G C A T G C T G A C T A G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CARGCCCAGGAGA
-AGGTCAAGGTCA
 T G A C C T G A T C A G A C T G T A G C T G A C G T A C C T G A A C T G C A T G C T G A C T A G C T G A
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CARGCCCAGGAGA--
-----ACAGGAAGTG
 T G A C C T G A T C A G A C T G T A G C T G A C G T A C C T G A A C T G C A T G C T G A C T A G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CARGCCCAGGAGA-
----NACAGGAAAT
 T G A C C T G A T C A G A C T G T A G C T G A C G T A C C T G A A C T G C A T G C T G A C T A G C T G A A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T