Information for 3-GCCTAGGCCT (Motif 12)

C T A G A G T C T G A C A G C T G C T A T C A G A C T G A T G C A T G C C A G T
Reverse Opposite:
G T C A T A C G A T C G T G A C A G T C C G A T T C G A A C T G T C A G A G T C
p-value:1e-8
log p-value:-1.926e+01
Information Content per bp:1.684
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif10.41%
Number of Background Sequences with motif2597.0
Percentage of Background Sequences with motif5.39%
Average Position of motif in Targets49.5 +/- 25.6bp
Average Position of motif in Background50.6 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---GCCTAGGCCT-
GGGGCCGAGGCCTG
 A C G T A C G T A C G T C T A G A G T C T G A C A G C T G C T A T C A G A C T G A T G C A T G C C A G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:GCCTAGGCCT
--CTAGGCCT
 C T A G A G T C T G A C A G C T G C T A T C A G A C T G A T G C A T G C C A G T
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:GCCTAGGCCT
--CNAGGCCT
 C T A G A G T C T G A C A G C T G C T A T C A G A C T G A T G C A T G C C A G T
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCCTAGGCCT--
ATGCCCGGGCATGT
 A C G T A C G T C T A G A G T C T G A C A G C T G C T A T C A G A C T G A T G C A T G C C A G T A C G T A C G T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGGCCT
TGCCTGAGGCN
 A C G T C T A G A G T C T G A C A G C T G C T A T C A G A C T G A T G C A T G C C A G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGGCCT
NGCCTNAGGCN
 A C G T C T A G A G T C T G A C A G C T G C T A T C A G A C T G A T G C A T G C C A G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGGCCT
NGCCTGAGGCN
 A C G T C T A G A G T C T G A C A G C T G C T A T C A G A C T G A T G C A T G C C A G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

EGR2/MA0472.2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGGCCT
TGCGTGGGCGT
 A C G T C T A G A G T C T G A C A G C T G C T A T C A G A C T G A T G C A T G C C A G T
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCCTAGGCCT--
NTNGCCTCAGGCNNN
 A C G T A C G T A C G T C T A G A G T C T G A C A G C T G C T A T C A G A C T G A T G C A T G C C A G T A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCTAGGCCT
CGTCTAGACA-
 A C G T C T A G A G T C T G A C A G C T G C T A T C A G A C T G A T G C A T G C C A G T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T