Information for 4-GCAGGGTCCCTGGTNA (Motif 11)

A C T G A G T C C T G A A C T G A C T G A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A
Reverse Opposite:
A C G T A C G T C G T A A G T C A G T C G T C A A C T G A C T G A C T G C G T A G T A C A G T C A G T C A G C T A C T G A G T C
p-value:1e-8
log p-value:-1.932e+01
Information Content per bp:1.894
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.0 +/- 11.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCAGGGTCCCTGGTNA
----NGTCCCNNGGGA
 A C T G A G T C C T G A A C T G A C T G A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A
A C G T A C G T A C G T A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

RXRB/MA0855.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCAGGGTCCCTGGTNA
--GGGGTCAAAGGTCA
 A C T G A G T C C T G A A C T G A C T G A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A
A C G T A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCAGGGTCCCTGGTNA
--GGGGTCAAAGGTCA
 A C T G A G T C C T G A A C T G A C T G A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A
A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCAGGGTCCCTGGTNA
NRRGGGTCTT------
 A C T G A G T C C T G A A C T G A C T G A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCAGGGTCCCTGGTNA
--GGGGTCAAAGGTCA
 A C T G A G T C C T G A A C T G A C T G A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A
A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCAGGGTCCCTGGTNA
--GAGGTCAAAGGTCA
 A C T G A G T C C T G A A C T G A C T G A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A
A C G T A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCAGGGTCCCTGGTNA
-AGGGGTCAGAGGTCA
 A C T G A G T C C T G A A C T G A C T G A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A
A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

EBF1/MA0154.3/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCAGGGTCCCTGGTNA--
----ANTCCCTNGGGAAT
 A C T G A G T C C T G A A C T G A C T G A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCAGGGTCCCTGGTNA
--GAGGTCAAAGGTCA
 A C T G A G T C C T G A A C T G A C T G A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A
A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCAGGGTCCCTGGTNA
----GTCCCCAGGGGA
 A C T G A G T C C T G A A C T G A C T G A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A
A C G T A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A