Information for 17-CTGCCMGCCMCCTKCG (Motif 43)

A G T C G C A T A C T G A G T C A G T C T G C A T A C G A T G C G T A C T G A C T A G C A G T C C G A T A C G T A T G C A T C G
Reverse Opposite:
A T G C T A C G G T C A C G T A A C T G A T C G A C T G C A T G A T C G A T G C A C G T A C T G A C T G T G A C C G T A A C T G
p-value:1e-8
log p-value:-1.913e+01
Information Content per bp:1.699
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif20.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets40.1 +/- 21.2bp
Average Position of motif in Background52.9 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGCCMGCCMCCTKCG-
GGTCCCGCCCCCTTCTC
 A G T C G C A T A C T G A G T C A G T C T G C A T A C G A T G C G T A C T G A C T A G C A G T C C G A T A C G T A T G C A T C G A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGCCMGCCMCCTKCG
-GCCCCGCCCCCTCCC
 A G T C G C A T A C T G A G T C A G T C T G C A T A C G A T G C G T A C T G A C T A G C A G T C C G A T A C G T A T G C A T C G
A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGCCMGCCMCCTKCG
CTGCCCGCA-------
 A G T C G C A T A C T G A G T C A G T C T G C A T A C G A T G C G T A C T G A C T A G C A G T C C G A T A C G T A T G C A T C G
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCMGCCMCCTKCG
NNTTCCCGCCC------
 A C G T A G T C G C A T A C T G A G T C A G T C T G C A T A C G A T G C G T A C T G A C T A G C A G T C C G A T A C G T A T G C A T C G
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGCCMGCCMCCTKCG
-TTCCCGCCWG-----
 A G T C G C A T A C T G A G T C A G T C T G C A T A C G A T G C G T A C T G A C T A G C A G T C C G A T A C G T A T G C A T C G
A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCMGCCMCCTKCG
NCTTCCCGCCC------
 A C G T A G T C G C A T A C T G A G T C A G T C T G C A T A C G A T G C G T A C T G A C T A G C A G T C C G A T A C G T A T G C A T C G
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTGCCMGCCMCCTKCG
TACGCCCCGCCACTCTG-
 A C G T A C G T A G T C G C A T A C T G A G T C A G T C T G C A T A C G A T G C G T A C T G A C T A G C A G T C C G A T A C G T A T G C A T C G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTGCCMGCCMCCTKCG
-GCCCCGCCCCC----
 A G T C G C A T A C T G A G T C A G T C T G C A T A C G A T G C G T A C T G A C T A G C A G T C C G A T A C G T A T G C A T C G
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTGCCMGCCMCCTKCG
ATTTCCCAGVAKSCY---
 A C G T A C G T A G T C G C A T A C T G A G T C A G T C T G C A T A C G A T G C G T A C T G A C T A G C A G T C C G A T A C G T A T G C A T C G
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTGCCMGCCMCCTKCG
TTTCCCGCCMAV----
 A G T C G C A T A C T G A G T C A G T C T G C A T A C G A T G C G T A C T G A C T A G C A G T C C G A T A C G T A T G C A T C G
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T A C G T A C G T