Information for 16-GGTGCCAGGGCCGSGC (Motif 41)

A C T G A T C G A G C T A C T G A T G C A G T C C G T A C T A G C T A G A T C G A T G C A G T C A C T G T A C G A T C G A G T C
Reverse Opposite:
A C T G A T G C A T G C A G T C C T A G A T C G A T G C G A T C A G T C C G A T C T A G A T C G A G T C T C G A A T G C A G T C
p-value:1e-8
log p-value:-1.915e+01
Information Content per bp:1.793
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets44.7 +/- 24.2bp
Average Position of motif in Background64.1 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGTGCCAGGGCCGSGC
-TTGCCAAG-------
 A C T G A T C G A G C T A C T G A T G C A G T C C G T A C T A G C T A G A T C G A T G C A G T C A C T G T A C G A T C G A G T C
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGTGCCAGGGCCGSGC
GGGGGCGGGGCC----
 A C T G A T C G A G C T A C T G A T G C A G T C C G T A C T A G C T A G A T C G A T G C A G T C A C T G T A C G A T C G A G T C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGTGCCAGGGCCGSGC
CGTGCCAAG-------
 A C T G A T C G A G C T A C T G A T G C A G T C C G T A C T A G C T A G A T C G A T G C A G T C A C T G T A C G A T C G A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGTGCCAGGGCCGSGC--
----ACATGCCCGGGCAT
 A C T G A T C G A G C T A C T G A T G C A G T C C G T A C T A G C T A G A T C G A T G C A G T C A C T G T A C G A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GGTGCCAGGGCCGSGC
AGCTCGGCGCCAAAAGC----
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A G C T A C T G A T G C A G T C C G T A C T A G C T A G A T C G A T G C A G T C A C T G T A C G A T C G A G T C
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GGTGCCAGGGCCGSGC
--NGCCTGAGGCN---
 A C T G A T C G A G C T A C T G A T G C A G T C C G T A C T A G C T A G A T C G A T G C A G T C A C T G T A C G A T C G A G T C
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGTGCCAGGGCCGSGC
AGGTGTCA---------
 A C G T A C T G A T C G A G C T A C T G A T G C A G T C C G T A C T A G C T A G A T C G A T G C A G T C A C T G T A C G A T C G A G T C
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GGTGCCAGGGCCGSGC---
-----CAGGCCNNGGCCNN
 A C T G A T C G A G C T A C T G A T G C A G T C C G T A C T A G C T A G A T C G A T G C A G T C A C T G T A C G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GGTGCCAGGGCCGSGC
CTGTTGCTAGGS------
 A C G T A C G T A C T G A T C G A G C T A C T G A T G C A G T C C G T A C T A G C T A G A T C G A T G C A G T C A C T G T A C G A T C G A G T C
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGTGCCAGGGCCGSGC
VBTGWCAGCB------
 A C T G A T C G A G C T A C T G A T G C A G T C C G T A C T A G C T A G A T C G A T G C A G T C A C T G T A C G A T C G A G T C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T