Information for 20-CTGATCACAATGG (Motif 35)

A G T C A C G T A T C G G C T A A C G T A G T C C G T A A G T C C G T A G T C A A C G T A C T G C T A G
Reverse Opposite:
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A C T G T G C A C A G T A T G C C G T A A C T G
p-value:1e-9
log p-value:-2.094e+01
Information Content per bp:1.825
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.4 +/- 20.7bp
Average Position of motif in Background39.5 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTGATCACAATGG---
-CTCACACAATGGCGC
 A G T C A C G T A T C G G C T A A C G T A G T C C G T A A G T C C G T A G T C A A C G T A C T G C T A G A C G T A C G T A C G T
A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:CTGATCACAATGG-
-----GACAATGNN
 A G T C A C G T A T C G G C T A A C G T A G T C C G T A A G T C C G T A G T C A A C G T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTGATCACAATGG-----
-NNTNNACAATGGGANNN
 A G T C A C G T A T C G G C T A A C G T A G T C C G T A A G T C C G T A G T C A A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CTGATCACAATGG
---VRAACAATGG
 A G T C A C G T A T C G G C T A A C G T A G T C C G T A A G T C C G T A G T C A A C G T A C T G C T A G
A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTGATCACAATGG
---RNAACAATGG
 A G T C A C G T A T C G G C T A A C G T A G T C C G T A A G T C C G T A G T C A A C G T A C T G C T A G
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTGATCACAATGG
----GAACAATGG
 A G T C A C G T A T C G G C T A A C G T A G T C C G T A A G T C C G T A G T C A A C G T A C T G C T A G
A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CTGATCACAATGG
-----AACAAAGG
 A G T C A C G T A T C G G C T A A C G T A G T C C G T A A G T C C G T A G T C A A C G T A C T G C T A G
A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CTGATCACAATGG
-----RACAAWGG
 A G T C A C G T A T C G G C T A A C G T A G T C C G T A A G T C C G T A G T C A A C G T A C T G C T A G
A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTGATCACAATGG-
----GAACAATGGN
 A G T C A C G T A T C G G C T A A C G T A G T C C G T A A G T C C G T A G T C A A C G T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CTGATCACAATGG-
----RAACAATGGN
 A G T C A C G T A T C G G C T A A C G T A G T C C G T A A G T C C G T A G T C A A C G T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C