Information for 6-CGTGAATTCTCAG (Motif 11)

A T G C A C T G A G C T A C T G C G T A C G T A A C G T A C G T A G T C G A C T A T G C G T C A C T A G
Reverse Opposite:
A G T C A C G T A T C G C G T A A C T G C G T A C G T A G A C T A C G T A G T C C T G A T A G C A T C G
p-value:1e-13
log p-value:-3.024e+01
Information Content per bp:1.814
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets71.2 +/- 18.4bp
Average Position of motif in Background35.0 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CGTGAATTCTCAG-
TNNNATGATTTCNNCNN
 A C G T A C G T A C G T A T G C A C T G A G C T A C T G C G T A C G T A A C G T A C G T A G T C G A C T A T G C G T C A C T A G A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CGTGAATTCTCAG-
----HTTTCCCASG
 A T G C A C T G A G C T A C T G C G T A C G T A A C G T A C G T A G T C G A C T A T G C G T C A C T A G A C G T
A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PB0171.1_Sox18_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGTGAATTCTCAG-
NNNNTGAATTCANNNC
 A C G T A C G T A T G C A C T G A G C T A C T G C G T A C G T A A C G T A C G T A G T C G A C T A T G C G T C A C T A G A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGTGAATTCTCAG----
--NNAATTCTCGNTNAN
 A T G C A C T G A G C T A C T G C G T A C G T A A C G T A C G T A G T C G A C T A T G C G T C A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGTGAATTCTCAG----
--AGTATTCTCGGTTGC
 A T G C A C T G A G C T A C T G C G T A C G T A A C G T A C G T A G T C G A C T A T G C G T C A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CGTGAATTCTCAG
NNTNTCATGAATGT----
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G A G C T A C T G C G T A C G T A A C G T A C G T A G T C G A C T A T G C G T C A C T A G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGTGAATTCTCAG
-TCCAATCCACA-
 A T G C A C T G A G C T A C T G C G T A C G T A A C G T A C G T A G T C G A C T A T G C G T C A C T A G
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGTGAATTCTCAG
-TTGACTTTT---
 A T G C A C T G A G C T A C T G C G T A C G T A A C G T A C G T A G T C G A C T A T G C G T C A C T A G
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CGTGAATTCTCAG---
----NTTTCTNAGAAA
 A T G C A C T G A G C T A C T G C G T A C G T A A C G T A C G T A G T C G A C T A T G C G T C A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGTGAATTCTCAG-
--SSAATCCACANN
 A T G C A C T G A G C T A C T G C G T A C G T A A C G T A C G T A G T C G A C T A T G C G T C A C T A G A C G T
A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C