Information for 5-CTAACACAGC (Motif 5)

A G T C C G A T C G T A G C T A G T A C G T C A G T A C C G T A A T C G T A G C
Reverse Opposite:
A T C G T A G C A C G T A C T G A C G T C A T G C G A T A C G T C G T A A C T G
p-value:1e-11
log p-value:-2.759e+01
Information Content per bp:1.837
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif89.4
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets46.1 +/- 30.5bp
Average Position of motif in Background55.3 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CTAACACAGC
----CACAGN
 A G T C C G A T C G T A G C T A G T A C G T C A G T A C C G T A A T C G T A G C
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CTAACACAGC-
AAAAATAACAAACGG
 A C G T A C G T A C G T A C G T A G T C C G A T C G T A G C T A G T A C G T C A G T A C C G T A A T C G T A G C A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTAACACAGC
TGCTGASTCAGC
 A C G T A C G T A G T C C G A T C G T A G C T A G T A C G T C A G T A C C G T A A T C G T A G C
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTAACACAGC------
-GAGCACAGCAGGACA
 A G T C C G A T C G T A G C T A G T A C G T C A G T A C C G T A A T C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTAACACAGC
AAACCACAGC
 A G T C C G A T C G T A G C T A G T A C G T C A G T A C C G T A A T C G T A G C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:6
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------CTAACACAGC---
RAAWNTGCTGASTCAGCANW
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C G T A G C T A G T A C G T C A G T A C C G T A A T C G T A G C A C G T A C G T A C G T
C T G A C G T A C G T A C G T A G A T C C G A T T A C G G T A C G C A T C A T G C G T A A T G C G C A T G T A C C G T A C A T G A T G C G C T A C T G A G C A T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTAACACAGC------
-CCACACAGCAGGAGA
 A G T C C G A T C G T A G C T A G T A C G T C A G T A C C G T A A T C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CTAACACAGC-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C G T A G C T A G T A C G T C A G T A C C G T A A T C G T A G C A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTAACACAGC
---ACAAAG-
 A G T C C G A T C G T A G C T A G T A C G T C A G T A C C G T A A T C G T A G C
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

MAFG/MA0659.1/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CTAACACAGC-----
AATNTGCTGACTCAGCANTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C G T A G C T A G T A C G T C A G T A C C G T A A T C G T A G C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C G T A G A C T T A C G G T A C G A C T C A T G G T C A T A G C C G A T G T A C C T G A C A T G A T G C C T G A G C T A C G A T G C A T G C A T