p-value: | 1e-11 |
log p-value: | -2.642e+01 |
Information Content per bp: | 1.848 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.78% |
Number of Background Sequences with motif | 0.6 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 34.8 +/- 29.9bp |
Average Position of motif in Background | 34.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0192.1_Tcfap2e_2/Jaspar
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GKWTTTKWWCAAGRAT -TTTTTTTTCNNGTN- |
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PB0145.1_Mafb_2/Jaspar
Match Rank: | 2 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GKWTTTKWWCAAGRAT ANATTTTTGCAANTN- |
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HOXC13/MA0907.1/Jaspar
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GKWTTTKWWCAAGRAT ---NTTTTACGAGN-- |
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PH0068.1_Hoxc13/Jaspar
Match Rank: | 4 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GKWTTTKWWCAAGRAT- -NAATTTTACGAGNTNN |
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PB0182.1_Srf_2/Jaspar
Match Rank: | 5 |
Score: | 0.53 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GKWTTTKWWCAAGRAT NNNNTTTTTTTTTNAAC--- |
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PH0048.1_Hoxa13/Jaspar
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GKWTTTKWWCAAGRAT- -ANATTTTACGAGNNNN |
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PB0139.1_Irf5_2/Jaspar
Match Rank: | 7 |
Score: | 0.53 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GKWTTTKWWCAAGRAT--- ----TTGACCGAGAATTCC |
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OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GKWTTTKWWCAAGRAT- --ATTTGCATAACAATG |
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PB0181.1_Spdef_2/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GKWTTTKWWCAAGRAT------ ------CTACTAGGATGTNNTN |
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PB0067.1_Sox18_1/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GKWTTTKWWCAAGRAT---- ----NNTNANAACAATTNNA |
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