Information for 12-CAAAAGAAAHHGATTT (Motif 20)

A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G T A G C A T G A C T A C T G C G T A A C G T A C G T A C G T
Reverse Opposite:
G T C A G T C A C G T A C G A T A G T C C T A G C G A T A C G T A C G T A C G T A G T C A C G T C G A T A G C T A C G T A C T G
p-value:1e-7
log p-value:-1.772e+01
Information Content per bp:1.822
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.4 +/- 23.7bp
Average Position of motif in Background41.3 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAAAAGAAAHHGATTT---
--NNTAAAAACGATGTTNT
 A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G T A G C A T G A C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAAAAGAAAHHGATTT
GGAAANTGAAACTNA---
 A C G T A C G T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G T A G C A T G A C T A C T G C G T A A C G T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAAAAGAAAHHGATTT
CAAAATCGAAACTAA---
 A C G T A C G T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G T A G C A T G A C T A C T G C G T A A C G T A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAAAAGAAAHHGATTT
TGCCAAAATAAACANN---
 A C G T A C G T A C G T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G T A G C A T G A C T A C T G C G T A A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAAAAGAAAHHGATTT
GAGAACCGAAACTG----
 A C G T A C G T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G T A G C A T G A C T A C T G C G T A A C G T A C G T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAAAAGAAAHHGATTT
AAATAAGAAAAAAC---
 A C G T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G T A G C A T G A C T A C T G C G T A A C G T A C G T A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAAAAGAAAHHGATTT
-NATGGAAAAN-----
 A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G T A G C A T G A C T A C T G C G T A A C G T A C G T A C G T
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAAAAGAAAHHGATTT
GAAAMTGAAACT-----
 A C G T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G T A G C A T G A C T A C T G C G T A A C G T A C G T A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAAAAGAAAHHGATTT
-AATGGAAAAT-----
 A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G T A G C A T G A C T A C T G C G T A A C G T A C G T A C G T
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CAAAAGAAAHHGATTT
GTTAAAAAAAAAAATTA--
 A C G T A C G T A C G T A G T C C G T A C T G A C G T A C G T A A C T G C G T A C G T A C G T A G C A T G A C T A C T G C G T A A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T A C G T