Information for 11-ATCCAAAGCTGAGTTT (Motif 18)

C G T A A C G T A T G C G A T C C G T A C T G A C G T A C T A G A G T C G A C T C T A G C G T A A C T G A G C T G A C T A C G T
Reverse Opposite:
C G T A C T G A C T G A G T A C G A C T A G T C C T G A A C T G G A T C A C G T A G C T A C G T C A T G A T C G C G T A C G A T
p-value:1e-8
log p-value:-2.015e+01
Information Content per bp:1.715
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.3 +/- 26.0bp
Average Position of motif in Background47.4 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATCCAAAGCTGAGTTT
WATGCAAATGAG-----
 A C G T C G T A A C G T A T G C G A T C C G T A C T G A C G T A C T A G A G T C G A C T C T A G C G T A A C T G A G C T G A C T A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATCCAAAGCTGAGTTT
ATATGCAAATNNN-----
 A C G T A C G T C G T A A C G T A T G C G A T C C G T A C T G A C G T A C T A G A G T C G A C T C T A G C G T A A C T G A G C T G A C T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATCCAAAGCTGAGTTT
TATGCWAATBAV-----
 A C G T C G T A A C G T A T G C G A T C C G T A C T G A C G T A C T A G A G T C G A C T C T A G C G T A A C T G A G C T G A C T A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATCCAAAGCTGAGTTT
TTATGCAAAT--------
 A C G T A C G T C G T A A C G T A T G C G A T C C G T A C T G A C G T A C T A G A G T C G A C T C T A G C G T A A C T G A G C T G A C T A C G T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATCCAAAGCTGAGTTT
TTGTATGCAAATTAGA----
 A C G T A C G T A C G T A C G T C G T A A C G T A T G C G A T C C G T A C T G A C G T A C T A G A G T C G A C T C T A G C G T A A C T G A G C T G A C T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATCCAAAGCTGAGTTT
ATATGCAAAT--------
 A C G T A C G T C G T A A C G T A T G C G A T C C G T A C T G A C G T A C T A G A G T C G A C T C T A G C G T A A C T G A G C T G A C T A C G T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ATCCAAAGCTGAGTTT
TATGCAAAT--------
 A C G T C G T A A C G T A T G C G A T C C G T A C T G A C G T A C T A G A G T C G A C T C T A G C G T A A C T G A G C T G A C T A C G T
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ATCCAAAGCTGAGTTT
TTGTATGCAAATTAGA----
 A C G T A C G T A C G T A C G T C G T A A C G T A T G C G A T C C G T A C T G A C G T A C T A G A G T C G A C T C T A G C G T A A C T G A G C T G A C T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ATCCAAAGCTGAGTTT
TTGTATGCAAATTAGA----
 A C G T A C G T A C G T A C G T C G T A A C G T A T G C G A T C C G T A C T G A C G T A C T A G A G T C G A C T C T A G C G T A A C T G A G C T G A C T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ATCCAAAGCTGAGTTT
NATTCAAAT--------
 A C G T C G T A A C G T A T G C G A T C C G T A C T G A C G T A C T A G A G T C G A C T C T A G C G T A A C T G A G C T G A C T A C G T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T