Information for 7-TGCACTGAGCGCAAGG (Motif 12)

C G A T A T C G G T A C C G T A A G T C A C G T A C T G G T C A T A C G A G T C A T C G A G T C G T C A C G T A C T A G C A T G
Reverse Opposite:
G A T C A G T C A C G T A C G T A C T G A T G C A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C T G A T G C C G T A
p-value:1e-9
log p-value:-2.095e+01
Information Content per bp:1.803
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 29.9bp
Average Position of motif in Background59.4 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGCACTGAGCGCAAGG
NNGCNCTGCGCGGC---
 A C G T C G A T A T C G G T A C C G T A A G T C A C G T A C T G G T C A T A C G A G T C A T C G A G T C G T C A C G T A C T A G C A T G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------TGCACTGAGCGCAAGG
NNNNTGAGCACTGTNNG-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G G T A C C G T A A G T C A C G T A C T G G T C A T A C G A G T C A T C G A G T C G T C A C G T A C T A G C A T G
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TGCACTGAGCGCAAGG
AATCGCACTGCATTCCG--
 A C G T A C G T A C G T C G A T A T C G G T A C C G T A A G T C A C G T A C T G G T C A T A C G A G T C A T C G A G T C G T C A C G T A C T A G C A T G
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGCACTGAGCGCAAGG
AAGCACTTAA-------
 A C G T C G A T A T C G G T A C C G T A A G T C A C G T A C T G G T C A T A C G A G T C A T C G A G T C G T C A C G T A C T A G C A T G
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TGCACTGAGCGCAAGG
-----AAACCGCAA--
 C G A T A T C G G T A C C G T A A G T C A C G T A C T G G T C A T A C G A G T C A T C G A G T C G T C A C G T A C T A G C A T G
A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGCACTGAGCGCAAGG
MRSCACTYAA-------
 A C G T C G A T A T C G G T A C C G T A A G T C A C G T A C T G G T C A T A C G A G T C A T C G A G T C G T C A C G T A C T A G C A T G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:TGCACTGAGCGCAAGG-
TGTCGTGACCCCTTAAT
 C G A T A T C G G T A C C G T A A G T C A C G T A C T G G T C A T A C G A G T C A T C G A G T C G T C A C G T A C T A G C A T G A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.49
Offset:5
Orientation:forward strand
Alignment:TGCACTGAGCGCAAGG
-----AAACCGCAAA-
 C G A T A T C G G T A C C G T A A G T C A C G T A C T G G T C A T A C G A G T C A T C G A G T C G T C A C G T A C T A G C A T G
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T

POL002.1_INR/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TGCACTGAGCGCAAGG
NNNANTGA--------
 C G A T A T C G G T A C C G T A A G T C A C G T A C T G G T C A T A C G A G T C A T C G A G T C G T C A C G T A C T A G C A T G
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:TGCACTGAGCGCAAGG
-----TGACCYCT---
 C G A T A T C G G T A C C G T A A G T C A C G T A C T G G T C A T A C G A G T C A T C G A G T C G T C A C G T A C T A G C A T G
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T