Information for 1-ATTCGTTNTC (Motif 1)

C G T A C A G T A C G T G T A C A C T G A C G T C G A T T G C A A G C T G T A C
Reverse Opposite:
C A T G T C G A A C G T C G T A C G T A G T A C C A T G C G T A G T C A C G A T
p-value:1e-16
log p-value:-3.895e+01
Information Content per bp:1.667
Number of Target Sequences with motif101.0
Percentage of Target Sequences with motif15.68%
Number of Background Sequences with motif2991.5
Percentage of Background Sequences with motif6.17%
Average Position of motif in Targets50.7 +/- 26.6bp
Average Position of motif in Background51.0 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0108.1_Msx3/Jaspar

Match Rank:1
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------ATTCGTTNTC
NNNTTAATTGGTTTTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C A G T A C G T G T A C A C T G A C G T C G A T T G C A A G C T G T A C
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATTCGTTNTC
ACTAGTTAAC
 C G T A C A G T A C G T G T A C A C T G A C G T C G A T T G C A A G C T G T A C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATTCGTTNTC---
TAATTGTTCTAAAC
 A C G T C G T A C A G T A C G T G T A C A C T G A C G T C G A T T G C A A G C T G T A C A C G T A C G T A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PH0044.1_Homez/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATTCGTTNTC---
AAAACATCGTTTTTAAG
 A C G T A C G T A C G T A C G T C G T A C A G T A C G T G T A C A C T G A C G T C G A T T G C A A G C T G T A C A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

PH0028.1_En1/Jaspar

Match Rank:5
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------ATTCGTTNTC
GNATTAATTAGTTNNC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C A G T A C G T G T A C A C T G A C G T C G A T T G C A A G C T G T A C
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

PH0005.1_Barhl1/Jaspar

Match Rank:6
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ATTCGTTNTC
GNNTTAATTGGTTGTT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C A G T A C G T G T A C A C T G A C G T C G A T T G C A A G C T G T A C
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATTCGTTNTC-
CTATAATTGTTAGCG
 A C G T A C G T A C G T A C G T C G T A C A G T A C G T G T A C A C T G A C G T C G A T T G C A A G C T G T A C A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATTCGTTNTC
CCATTGTTNY-
 A C G T C G T A C A G T A C G T G T A C A C T G A C G T C G A T T G C A A G C T G T A C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----ATTCGTTNTC--
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C G T C G T A C A G T A C G T G T A C A C T G A C G T C G A T T G C A A G C T G T A C A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATTCGTTNTC---
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T C G T A C A G T A C G T G T A C A C T G A C G T C G A T T G C A A G C T G T A C A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C