Information for 10-GGCCCGTCTG (Motif 20)

A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A A G T C A C T G A C T G A C T G A G T C A G T C
p-value:1e-6
log p-value:-1.513e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.2 +/- 25.0bp
Average Position of motif in Background54.2 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GGCCCGTCTG-
-VBSYGTCTGG
 A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GGCCCGTCTG-
---CTGTCTGG
 A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGCCCGTCTG-----
GGNGCGNCTGTTNNN
 A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGCCCGTCTG------
NNTNNTGTCTGGNNTNG
 A C G T A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGCCCGTCTG---
GGGGCTYGKCTGGGA
 A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGCCCGTCTG--
--ACCATCTGTT
 A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGCCCGTCTG--
--GCCATCTGTT
 A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCCCGTCTG-----
CCNNACCATCTGGCCTN
 A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGCCCGTCTG----
----GGTCTGGCAT
 A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGCCCGTCTG-
---TWGTCTGV
 A C T G A C T G A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G