Information for 6-SCCTSATCTW (Motif 17)

A T G C A G T C G T A C A C G T T A G C G C T A G C A T T G A C A G C T C G A T
Reverse Opposite:
G C T A T C G A A C T G C G T A C G A T A T C G C G T A A C T G C T A G A T C G
p-value:1e-8
log p-value:-1.905e+01
Information Content per bp:1.708
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif6.06%
Number of Background Sequences with motif1165.8
Percentage of Background Sequences with motif2.40%
Average Position of motif in Targets51.9 +/- 26.9bp
Average Position of motif in Background49.8 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3/MA0037.2/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:SCCTSATCTW
-TCTTATCT-
 A T G C A G T C G T A C A C G T T A G C G C T A G C A T T G A C A G C T C G A T
A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:SCCTSATCTW-
-YCTTATCTBN
 A T G C A G T C G T A C A C G T T A G C G C T A G C A T T G A C A G C T C G A T A C G T
A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:SCCTSATCTW
NCCTTATCTG
 A T G C A G T C G T A C A C G T T A G C G C T A G C A T T G A C A G C T C G A T
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:SCCTSATCTW
NNCTTATCTN
 A T G C A G T C G T A C A C G T T A G C G C T A G C A T T G A C A G C T C G A T
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C

Gata4/MA0482.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:SCCTSATCTW--
-TCTTATCTCCC
 A T G C A G T C G T A C A C G T T A G C G C T A G C A T T G A C A G C T C G A T A C G T A C G T
A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:SCCTSATCTW-
-YCTTATCWVN
 A T G C A G T C G T A C A C G T T A G C G C T A G C A T T G A C A G C T C G A T A C G T
A C G T A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:SCCTSATCTW-
TTCTTATCTGT
 A T G C A G T C G T A C A C G T T A G C G C T A G C A T T G A C A G C T C G A T A C G T
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:SCCTSATCTW
-YSTTATCT-
 A T G C A G T C G T A C A C G T T A G C G C T A G C A T T G A C A G C T C G A T
A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:SCCTSATCTW
-TCTTATCT-
 A T G C A G T C G T A C A C G T T A G C G C T A G C A T T G A C A G C T C G A T
A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---SCCTSATCTW----
NNANTCTTATCTNNNNN
 A C G T A C G T A C G T A T G C A G T C G T A C A C G T T A G C G C T A G C A T T G A C A G C T C G A T A C G T A C G T A C G T A C G T
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A