Information for 9-YGWRGCTGATTTW (Motif 14)

A G C T C T A G C G T A C T G A A C T G A G T C A C G T A T C G C G T A A C G T A C G T A C G T C G A T
Reverse Opposite:
G C A T C G T A C G T A C G T A A C G T A T G C C G T A A C T G A G T C A G C T C G A T A G T C C T G A
p-value:1e-8
log p-value:-2.038e+01
Information Content per bp:1.859
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.6 +/- 24.4bp
Average Position of motif in Background39.0 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:YGWRGCTGATTTW-----
-TNNNATGATTTCNNCNN
 A G C T C T A G C G T A C T G A A C T G A G T C A C G T A T C G C G T A A C G T A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:YGWRGCTGATTTW
---CNGTGATTTN
 A G C T C T A G C G T A C T G A A C T G A G T C A C G T A T C G C G T A A C G T A C G T A C G T C G A T
A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

Hoxc9/MA0485.1/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:YGWRGCTGATTTW-----
-----NTGATTTATGGCC
 A G C T C T A G C G T A C T G A A C T G A G T C A C G T A T C G C G T A A C G T A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:4
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:YGWRGCTGATTTW-----
------TGATTTATGGCC
 A G C T C T A G C G T A C T G A A C T G A G T C A C G T A T C G C G T A A C G T A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxa9/MA0594.1/Jaspar

Match Rank:5
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:YGWRGCTGATTTW----
------TGATTTATGGC
 A G C T C T A G C G T A C T G A A C T G A G T C A C G T A T C G C G T A A C G T A C G T A C G T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

POU6F2/MA0793.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:YGWRGCTGATTTW
---AGCTCATTAT
 A G C T C T A G C G T A C T G A A C T G A G T C A C G T A T C G C G T A A C G T A C G T A C G T C G A T
A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:YGWRGCTGATTTW
-----TTGATTGN
 A G C T C T A G C G T A C T G A A C T G A G T C A C G T A T C G C G T A A C G T A C G T A C G T C G A T
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:YGWRGCTGATTTW
---TGCTGACTCA
 A G C T C T A G C G T A C T G A A C T G A G T C A C G T A T C G C G T A A C G T A C G T A C G T C G A T
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:9
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:YGWRGCTGATTTW-----
------TGATTTATGGCC
 A G C T C T A G C G T A C T G A A C T G A G T C A C G T A T C G C G T A A C G T A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-YGWRGCTGATTTW-
AAANTGCTGACTNAG
 A C G T A G C T C T A G C G T A C T G A A C T G A G T C A C G T A T C G C G T A A C G T A C G T A C G T C G A T A C G T
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G