Information for 8-GTGGGCAAGTCCA (Motif 13)

A T C G A C G T A C T G A C T G A C T G A T G C C G T A C G T A A T C G A C G T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G T A A T G C A C G T A C G T A T C G A G T C G T A C A G T C C G T A A T G C
p-value:1e-9
log p-value:-2.173e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.2 +/- 19.0bp
Average Position of motif in Background6.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTGGGCAAGTCCA----
-GGCAAAAGTCCAATAA
 A T C G A C G T A C T G A C T G A C T G A T G C C G T A C G T A A T C G A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GTGGGCAAGTCCA
---GGAAATTCCC
 A T C G A C G T A C T G A C T G A C T G A T G C C G T A C G T A A T C G A C G T A G T C A G T C C G T A
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGCAAGTCCA
NGTGGGCAT-----
 A C G T A T C G A C G T A C T G A C T G A C T G A T G C C G T A C G T A A T C G A C G T A G T C A G T C C G T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGGGCAAGTCCA
-NGGGGATTTCCC
 A T C G A C G T A C T G A C T G A C T G A T G C C G T A C G T A A T C G A C G T A G T C A G T C C G T A
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGCAAGTCCA
CSTGGGAAAD----
 A C G T A T C G A C G T A C T G A C T G A C T G A T G C C G T A C G T A A T C G A C G T A G T C A G T C C G T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTGGGCAAGTCCA--
GGGGTCAAAGTCCAAT
 A C G T A T C G A C G T A C T G A C T G A C T G A T G C C G T A C G T A A T C G A C G T A G T C A G T C C G T A A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GTGGGCAAGTCCA--
-----CAAGGHCANV
 A T C G A C G T A C T G A C T G A C T G A T G C C G T A C G T A A T C G A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GTGGGCAAGTCCA
GGGCCGTGTGCAAAAA--
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C T G A T G C C G T A C G T A A T C G A C G T A G T C A G T C C G T A
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTGGGCAAGTCCA
---GGAAANCCCC
 A T C G A C G T A C T G A C T G A C T G A T G C C G T A C G T A A T C G A C G T A G T C A G T C C G T A
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GTGGGCAAGTCCA
NNNNTTGGGCACNNCN-
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C T G A T G C C G T A C G T A A T C G A C G T A G T C A G T C C G T A
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T