Information for 4-KCCAACCMACAWR (Motif 5)

A C G T A G T C G T A C C G T A C G T A A G T C A G T C G T A C C G T A A G T C C G T A C G A T C T A G
Reverse Opposite:
A G T C C G T A A C G T A C T G C G A T A C T G A C T G A C T G A C G T A C G T A C T G A C T G T G C A
p-value:1e-12
log p-value:-2.771e+01
Information Content per bp:1.871
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.7 +/- 24.8bp
Average Position of motif in Background54.3 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:KCCAACCMACAWR
TCCAATCCACA--
 A C G T A G T C G T A C C G T A C G T A A G T C A G T C G T A C C G T A A G T C C G T A C G A T C T A G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:KCCAACCMACAWR
-SSAATCCACANN
 A C G T A G T C G T A C C G T A C G T A A G T C A G T C G T A C C G T A A G T C C G T A C G A T C T A G
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----KCCAACCMACAWR
ACTATGCCAACCTACC--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A C G T A A G T C A G T C G T A C C G T A A G T C C G T A C G A T C T A G
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:KCCAACCMACAWR
---AAACCACANN
 A C G T A G T C G T A C C G T A C G T A A G T C A G T C G T A C C G T A A G T C C G T A C G A T C T A G
A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:KCCAACCMACAWR-
---AAACCACAGAN
 A C G T A G T C G T A C C G T A C G T A A G T C A G T C G T A C C G T A A G T C C G T A C G A T C T A G A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:KCCAACCMACAWR-
--NWAACCACADNN
 A C G T A G T C G T A C C G T A C G T A A G T C A G T C G T A C C G T A A G T C C G T A C G A T C T A G A C G T
A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:KCCAACCMACAWR
--NAAACCACAG-
 A C G T A G T C G T A C C G T A C G T A A G T C A G T C G T A C C G T A A G T C C G T A C G A T C T A G
A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:KCCAACCMACAWR---
TCGTACCCGCATCATT
 A C G T A G T C G T A C C G T A C G T A A G T C A G T C G T A C C G T A A G T C C G T A C G A T C T A G A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:KCCAACCMACAWR
---AACCGANA--
 A C G T A G T C G T A C C G T A C G T A A G T C A G T C G T A C C G T A A G T C C G T A C G A T C T A G
A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:KCCAACCMACAWR--
AACAAACAACAAGAG
 A C G T A G T C G T A C C G T A C G T A A G T C A G T C G T A C C G T A A G T C C G T A C G A T C T A G A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G