Information for 11-GACGTGCACG (Motif 41)

T C A G G T C A A G T C A T C G A C G T A C T G G T A C C G T A A G T C A C T G
Reverse Opposite:
G T A C A C T G A C G T A C T G A G T C C G T A A T G C A C T G A C G T A G T C
p-value:1e-3
log p-value:-8.952e+00
Information Content per bp:1.868
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif46.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets45.1 +/- 27.6bp
Average Position of motif in Background52.6 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GACGTGCACG
GGACGTGC---
 A C G T T C A G G T C A A G T C A T C G A C G T A C T G G T A C C G T A A G T C A C T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GACGTGCACG
RTACGTGC---
 A C G T T C A G G T C A A G T C A T C G A C G T A C T G G T A C C G T A A G T C A C T G
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GACGTGCACG
TACGTGCV--
 T C A G G T C A A G T C A T C G A C G T A C T G G T A C C G T A A G T C A C T G
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GACGTGCACG
GGGTACGTGC---
 A C G T A C G T A C G T T C A G G T C A A G T C A T C G A C G T A C T G G T A C C G T A A G T C A C T G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GACGTGCACG-----
CAGATGTGCACATACGT
 A C G T A C G T T C A G G T C A A G T C A T C G A C G T A C T G G T A C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GACGTGCACG-----
TACATGTGCACATAAAA
 A C G T A C G T T C A G G T C A A G T C A T C G A C G T A C T G G T A C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Arnt/MA0004.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GACGTGCACG
CACGTG----
 T C A G G T C A A G T C A T C G A C G T A C T G G T A C C G T A A G T C A C T G
G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GACGTGCACG
TGACGT-----
 A C G T T C A G G T C A A G T C A T C G A C G T A C T G G T A C C G T A A G T C A C T G
A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GACGTGCACG
ACACGTGC---
 A C G T T C A G G T C A A G T C A T C G A C G T A C T G G T A C C G T A A G T C A C T G
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GACGTGCACG
TCACGTGC---
 A C G T T C A G G T C A A G T C A T C G A C G T A C T G G T A C C G T A A G T C A C T G
G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T