Information for 18-AKTTTGAACACAM (Motif 30)

C G T A A C T G A C G T A C G T A C G T C T A G C G T A C G T A G T A C C G T A T A G C C G T A G T C A
Reverse Opposite:
A C G T A C G T A T C G A C G T A C T G A C G T A C G T A G T C G T C A G T C A C G T A G T A C A C G T
p-value:1e-7
log p-value:-1.690e+01
Information Content per bp:1.909
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets78.8 +/- 11.7bp
Average Position of motif in Background37.8 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AKTTTGAACACAM
-ATTTGAATT---
 C G T A A C T G A C G T A C G T A C G T C T A G C G T A C G T A G T A C C G T A T A G C C G T A G T C A
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AKTTTGAACACAM---
-ATTTGCATACAATGG
 C G T A A C T G A C G T A C G T A C G T C T A G C G T A C G T A G T A C C G T A T A G C C G T A G T C A A C G T A C G T A C G T
A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AKTTTGAACACAM
--TTTGAAACCG-
 C G T A A C T G A C G T A C G T A C G T C T A G C G T A C G T A G T A C C G T A T A G C C G T A G T C A
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AKTTTGAACACAM---
AAAGTAAACAAAAATT
 C G T A A C T G A C G T A C G T A C G T C T A G C G T A C G T A G T A C C G T A T A G C C G T A G T C A A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AKTTTGAACACAM---
NNTTTGCACACGGCCC
 C G T A A C T G A C G T A C G T A C G T C T A G C G T A C G T A G T A C C G T A T A G C C G T A G T C A A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AKTTTGAACACAM--
TACATGTGCACATAAAA
 A C G T A C G T C G T A A C T G A C G T A C G T A C G T C T A G C G T A C G T A G T A C C G T A T A G C C G T A G T C A A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0194.1_Zbtb12_2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AKTTTGAACACAM
TATCATTAGAACGCT-
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T C T A G C G T A C G T A G T A C C G T A T A G C C G T A G T C A
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AKTTTGAACACAM
WWTRTAAACAVG-
 C G T A A C T G A C G T A C G T A C G T C T A G C G T A C G T A G T A C C G T A T A G C C G T A G T C A
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G A C G T

MTF1/MA0863.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AKTTTGAACACAM---
--TTTGCACACGGCAC
 C G T A A C T G A C G T A C G T A C G T C T A G C G T A C G T A G T A C C G T A T A G C C G T A G T C A A C G T A C G T A C G T
A C G T A C G T C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AKTTTGAACACAM
--TTGCAACATN-
 C G T A A C T G A C G T A C G T A C G T C T A G C G T A C G T A G T A C C G T A T A G C C G T A G T C A
A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T