Information for 7-CTVTGTAGCTCCCATT (Motif 11)

A T G C A G C T T A C G A C G T A C T G A G C T C T G A C T A G G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A C G A T A C T G A C T G C T A G C G T A C A T G A G T C A G C T C T G A A G T C C G T A A G T C C T G A A T C G
p-value:1e-10
log p-value:-2.474e+01
Information Content per bp:1.775
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.7 +/- 15.3bp
Average Position of motif in Background27.7 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTVTGTAGCTCCCATT-------
------TGTTCCCATTGTGTACT
 A T G C A G C T T A C G A C G T A C T G A G C T C T G A C T A G G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

PB0033.1_Irf3_1/Jaspar

Match Rank:2
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTVTGTAGCTCCCATT---
-----CAGTTTCGNTTCTN
 A T G C A G C T T A C G A C G T A C T G A G C T C T G A C T A G G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTVTGTAGCTCCCATT---
--NNNTCCATCCCATAANN
 A T G C A G C T T A C G A C G T A C T G A G C T C T G A C T A G G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CTVTGTAGCTCCCATT
---TGTGGATTNNN--
 A T G C A G C T T A C G A C G T A C T G A G C T C T G A C T A G G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CTVTGTAGCTCCCATT--
------AGTTTCAKTTTC
 A T G C A G C T T A C G A C G T A C T G A G C T C T G A C T A G G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.50
Offset:7
Orientation:forward strand
Alignment:CTVTGTAGCTCCCATT
-------GCTCCG---
 A T G C A G C T T A C G A C G T A C T G A G C T C T G A C T A G G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.49
Offset:10
Orientation:reverse strand
Alignment:CTVTGTAGCTCCCATT--
----------BCMATTAG
 A T G C A G C T T A C G A C G T A C T G A G C T C T G A C T A G G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.49
Offset:11
Orientation:forward strand
Alignment:CTVTGTAGCTCCCATT---
-----------CCWTTGTY
 A T G C A G C T T A C G A C G T A C T G A G C T C T G A C T A G G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

BSX/MA0876.1/Jaspar

Match Rank:9
Score:0.49
Offset:10
Orientation:forward strand
Alignment:CTVTGTAGCTCCCATT--
----------CCAATTAA
 A T G C A G C T T A C G A C G T A C T G A G C T C T G A C T A G G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.49
Offset:11
Orientation:forward strand
Alignment:CTVTGTAGCTCCCATT---
-----------CCTTTGTT
 A T G C A G C T T A C G A C G T A C T G A G C T C T G A C T A G G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T