Information for 10-CGGCTGCAGCCGG (Motif 19)

A G T C A C T G A C T G A G T C A C G T A T C G A T G C C T G A A C T G A G T C A G T C A C T G T A C G
Reverse Opposite:
A G T C A G T C A C T G A C T G A G T C A G C T A T C G A T G C C G T A A C T G A G T C A G T C A C T G
p-value:1e-6
log p-value:-1.391e+01
Information Content per bp:1.905
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.3 +/- 26.5bp
Average Position of motif in Background13.5 +/- 4.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CGGCTGCAGCCGG----
AACCGGTTNNAACCGGTTTN
 A C G T A C G T A C G T A G T C A C T G A C T G A G T C A C G T A T C G A T G C C T G A A C T G A G T C A G T C A C T G T A C G A C G T A C G T A C G T A C G T
C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T C T A G C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T A C T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGGCTGCAGCCGG
AGCAGCTGCTNN---
 A C G T A C G T A G T C A C T G A C T G A G T C A C G T A T C G A T G C C T G A A C T G A G T C A G T C A C T G T A C G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGGCTGCAGCCGG
-NGCTN-------
 A G T C A C T G A C T G A G T C A C G T A T C G A T G C C T G A A C T G A G T C A G T C A C T G T A C G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGGCTGCAGCCGG
GACAGCTGCAG----
 A C G T A C G T A G T C A C T G A C T G A G T C A C G T A T C G A T G C C T G A A C T G A G T C A G T C A C T G T A C G
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CGGCTGCAGCCGG
CTCAGCAGCTGCTACTG-
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C A C G T A T C G A T G C C T G A A C T G A G T C A G T C A C T G T A C G
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGGCTGCAGCCGG
AACAGCTGCAG----
 A C G T A C G T A G T C A C T G A C T G A G T C A C G T A T C G A T G C C T G A A C T G A G T C A G T C A C T G T A C G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CGGCTGCAGCCGG
NCAGCTGCTG----
 A C G T A G T C A C T G A C T G A G T C A C G T A T C G A T G C C T G A A C T G A G T C A G T C A C T G T A C G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGCTGCAGCCGG
-GGCTCYAKCAYC
 A G T C A C T G A C T G A G T C A C G T A T C G A T G C C T G A A C T G A G T C A G T C A C T G T A C G
A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CGGCTGCAGCCGG
NNACAGCTGC------
 A C G T A C G T A C G T A G T C A C T G A C T G A G T C A C G T A T C G A T G C C T G A A C T G A G T C A G T C A C T G T A C G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCTGCAGCCGG
NGNGACAGCTGCN-----
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C A C G T A T C G A T G C C T G A A C T G A G T C A G T C A C T G T A C G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T