Information for 1-TGATCTAAAT (Motif 5)

A C G T A C T G C G T A C G A T A G T C A C G T C G T A C G T A C G T A A C G T
Reverse Opposite:
G T C A A C G T A C G T A C G T C G T A A C T G C G T A A C G T A G T C C G T A
p-value:1e-11
log p-value:-2.665e+01
Information Content per bp:1.940
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.1 +/- 26.5bp
Average Position of motif in Background48.0 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGATCTAAAT---
TTGACCTANTTATN
 A C G T A C G T A C T G C G T A C G A T A G T C A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGATCTAAAT
TGACCTARTT
 A C G T A C T G C G T A C G A T A G T C A C G T C G T A C G T A C G T A A C G T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGATCTAAAT
TGACCTTGAT
 A C G T A C T G C G T A C G A T A G T C A C G T C G T A C G T A C G T A A C G T
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGATCTAAAT
ATGATGCAAT-
 A C G T A C G T A C T G C G T A C G A T A G T C A C G T C G T A C G T A C G T A A C G T
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------TGATCTAAAT
NNTTCCTTTGATCTANA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G A T A G T C A C G T C G T A C G T A C G T A A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGATCTAAAT
MTGATGCAAT-
 A C G T A C G T A C T G C G T A C G A T A G T C A C G T C G T A C G T A C G T A A C G T
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGATCTAAAT---
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G A T A G T C A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGATCTAAAT
GTGACCTT---
 A C G T A C G T A C T G C G T A C G A T A G T C A C G T C G T A C G T A C G T A A C G T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.60
Offset:-8
Orientation:reverse strand
Alignment:--------TGATCTAAAT
NNTTCCTTTGATCTNNA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G A T A G T C A C G T C G T A C G T A C G T A A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------TGATCTAAAT
AATCCCTTTGATCTATC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G A T A G T C A C G T C G T A C G T A C G T A A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C A C G T