Information for 23-GATGTTAATACGGGAT (Motif 38)

A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C T G A C T G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G T C A G T C A C T G A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A A C G T A G T C
p-value:1e-4
log p-value:-9.946e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.7 +/- 18.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF410/MA0752.1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GATGTTAATACGGGAT---
--GANTATTATGGGATGGA
 A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GATGTTAATACGGGAT
NNNTTTNTAATACNG---
 A C G T A C G T A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C T G A C T G A C T G C G T A A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GATGTTAATACGGGAT
TATGCWAATBAV----
 A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C T G A C T G A C T G C G T A A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GATGTTAATACGGGAT
TAAGATTATAATACGG---
 A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C T G A C T G A C T G C G T A A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GATGTTAATACGGGAT---
--TGCGCATAGGGGAGGAG
 A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

Arid3b/MA0601.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GATGTTAATACGGGAT
-ATATTAATTAA----
 A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C T G A C T G A C T G C G T A A C G T
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T A C G T A C G T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GATGTTAATACGGGAT--
-CATACAATACGAAATAA
 A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GATGTTAATACGGGAT
AGGTGTTAAT-------
 A C G T A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C T G A C T G A C T G C G T A A C G T
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GATGTTAATACGGGAT
TATGTAAATAT-----
 A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C T G A C T G A C T G C G T A A C G T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GATGTTAATACGGGAT
TATGCAAAT-------
 A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C T G A C T G A C T G C G T A A C G T
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T