Information for 10-RCGGGATCTT (Motif 35)

C T A G A G T C A C T G A C T G A T C G C T G A A C G T A G T C A G C T A G C T
Reverse Opposite:
C T G A C T G A C T A G C G T A A G C T A T G C G T A C A G T C A C T G G A T C
p-value:1e-5
log p-value:-1.166e+01
Information Content per bp:1.784
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif27.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets49.0 +/- 21.5bp
Average Position of motif in Background46.4 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--RCGGGATCTT
GGGCGGGACC--
 A C G T A C G T C T A G A G T C A C T G A C T G A T C G C T G A A C G T A G T C A G C T A G C T
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:RCGGGATCTT
NRRGGGTCTT
 C T A G A G T C A C T G A C T G A T C G C T G A A C G T A G T C A G C T A G C T
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-RCGGGATCTT
ANCAGGATGT-
 A C G T C T A G A G T C A C T G A C T G A T C G C T G A A C G T A G T C A G C T A G C T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----RCGGGATCTT
BTKGGCGGGAAA--
 A C G T A C G T A C G T A C G T C T A G A G T C A C T G A C T G A T C G C T G A A C G T A G T C A G C T A G C T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-RCGGGATCTT
GGCGGGAARN-
 A C G T C T A G A G T C A C T G A C T G A T C G C T G A A C G T A G T C A G C T A G C T
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:RCGGGATCTT
--NGGATTAN
 C T A G A G T C A C T G A C T G A T C G C T G A A C G T A G T C A G C T A G C T
A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---RCGGGATCTT
CWGGCGGGAA---
 A C G T A C G T A C G T C T A G A G T C A C T G A C T G A T C G C T G A A C G T A G T C A G C T A G C T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RCGGGATCTT
ACGTCATC--
 C T A G A G T C A C T G A C T G A T C G C T G A A C G T A G T C A G C T A G C T
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--RCGGGATCTT
GGGCGGGAAGG-
 A C G T A C G T C T A G A G T C A C T G A C T G A T C G C T G A A C G T A G T C A G C T A G C T
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

MLX/MA0663.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---RCGGGATCTT
ATCACGTGAT---
 A C G T A C G T A C G T C T A G A G T C A C T G A C T G A T C G C T G A A C G T A G T C A G C T A G C T
C T G A A C G T A G T C C T G A A G T C C A T G C G A T C A T G C T G A G A C T A C G T A C G T A C G T