Information for 6-TGCCTGGGCVGCC (Motif 24)

A C G T A T C G A G T C A G T C C G A T C T A G A T C G A C T G A G T C T C G A A C T G A T G C G A T C
Reverse Opposite:
C A T G A T C G T G A C A C G T A C T G G T A C T A G C A G T C C G T A A C T G C T A G T A G C C G T A
p-value:1e-7
log p-value:-1.731e+01
Information Content per bp:1.802
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.6 +/- 17.1bp
Average Position of motif in Background45.9 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TGCCTGGGCVGCC
WDNCTGGGCA---
 A C G T A T C G A G T C A G T C C G A T C T A G A T C G A C T G A G T C T C G A A C T G A T G C G A T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGCCTGGGCVGCC--
TGCCTGCGYCMCCTT
 A C G T A T C G A G T C A G T C C G A T C T A G A T C G A C T G A G T C T C G A A C T G A T G C G A T C A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTGGGCVGCC
ATGCCCGGGCATGT
 A C G T A C G T A T C G A G T C A G T C C G A T C T A G A T C G A C T G A G T C T C G A A C T G A T G C G A T C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

EGR2/MA0472.2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGCCTGGGCVGCC
TGCGTGGGCGT--
 A C G T A T C G A G T C A G T C C G A T C T A G A T C G A C T G A G T C T C G A A C T G A T G C G A T C
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGCCTGGGCVGCC
ANTGCGTGGGCGTNN
 A C G T A C G T A C G T A T C G A G T C A G T C C G A T C T A G A T C G A C T G A G T C T C G A A C T G A T G C G A T C
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G

EGR4/MA0733.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGCCTGGGCVGCC
AANTGCGTGGGCGTNN
 A C G T A C G T A C G T A C G T A T C G A G T C A G T C C G A T C T A G A T C G A C T G A G T C T C G A A C T G A T G C G A T C
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGCCTGGGCVGCC--
---CTGCGCATGCGC
 A C G T A T C G A G T C A G T C C G A T C T A G A T C G A C T G A G T C T C G A A C T G A T G C G A T C A C G T A C G T
A C G T A C G T A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCCTGGGCVGCC
CTGTCTGG------
 A C G T A C G T A T C G A G T C A G T C C G A T C T A G A T C G A C T G A G T C T C G A A C T G A T G C G A T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGCCTGGGCVGCC
NGCGTGGGCGGR-
 A C G T A T C G A G T C A G T C C G A T C T A G A T C G A C T G A G T C T C G A A C T G A T G C G A T C
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGCCTGGGCVGCC
VBSYGTCTGG------
 A C G T A C G T A C G T A C G T A T C G A G T C A G T C C G A T C T A G A T C G A C T G A G T C T C G A A C T G A T G C G A T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T