Information for 4-ATTAAATCTCTAG (Motif 11)

C G T A A C G T A C G T C T G A C T G A C G T A A C G T A G T C C G A T A G T C A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C T G C G T A A C T G C G T A A C G T A G C T A G C T C G T A G T C A A C G T
p-value:1e-9
log p-value:-2.169e+01
Information Content per bp:1.936
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 26.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATTAAATCTCTAG
ATTAAA-------
 C G T A A C G T A C G T C T G A C T G A C G T A A C G T A G T C C G A T A G T C A C G T C G T A A C T G
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATTAAATCTCTAG
--CAAATCACTG-
 C G T A A C G T A C G T C T G A C T G A C G T A A C G T A G T C C G A T A G T C A C G T C G T A A C T G
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:3
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------ATTAAATCTCTAG
TAGAGGGATTAAATTTC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T G A C T G A C G T A A C G T A G T C C G A T A G T C A C G T C G T A A C T G
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C A C G T A C G T A C G T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------ATTAAATCTCTAG
NNNNNBAGATAWYATCTVHN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T G A C T G A C G T A A C G T A G T C C G A T A G T C A C G T C G T A A C T G
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATTAAATCTCTAG
GGCCATAAATCAC---
 A C G T A C G T A C G T C G T A A C G T A C G T C T G A C T G A C G T A A C G T A G T C C G A T A G T C A C G T C G T A A C T G
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T A C G T

PB0125.1_Gata3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------ATTAAATCTCTAG--
NNNNNCGATANNATCTNNNNAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T G A C T G A C G T A A C G T A G T C C G A T A G T C A C G T C G T A A C T G A C G T A C G T
C A G T C G T A C G T A T A C G A G C T G A T C C T A G T C G A A G C T C T G A T G C A C G T A C T G A C A G T G A T C C G A T T C G A A G T C G C T A C G T A T G C A C T G A

PH0125.1_Obox5_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATTAAATCTCTAG-
GATAATTAATCCCTCTT
 A C G T A C G T A C G T C G T A A C G T A C G T C T G A C T G A C G T A A C G T A G T C C G A T A G T C A C G T C G T A A C T G A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

Lhx3/MA0135.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATTAAATCTCTAG
AAATTAATTAATC--
 A C G T A C G T C G T A A C G T A C G T C T G A C T G A C G T A A C G T A G T C C G A T A G T C A C G T C G T A A C T G
C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATTAAATCTCTAG
ACTAATTAAA-------
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T G A C T G A C G T A A C G T A G T C C G A T A G T C A C G T C G T A A C T G
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0120.1_Nkx6-3/Jaspar

Match Rank:10
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------ATTAAATCTCTAG
CNNANTAATTAATTNNC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T G A C T G A C G T A A C G T A G T C C G A T A G T C A C G T C G T A A C T G
T G A C T C G A T G C A T C G A A C T G G A C T T G C A C G T A G A C T G A C T C T G A G C T A C G A T C G A T C G A T A C G T G A T C A C G T A C G T A C G T