Information for 7-CCTGAMAGSGGMR (Motif 8)

A G T C A G T C A C G T A C T G C G T A G T C A C G T A A C T G T A G C C T A G A C T G G T C A T C A G
Reverse Opposite:
A G T C A C G T A G T C A G T C A T C G A G T C A C G T A C G T A C G T A G T C C G T A A C T G A C T G
p-value:1e-10
log p-value:-2.512e+01
Information Content per bp:1.872
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.4 +/- 26.5bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCTGAMAGSGGMR
-TTGACAGC----
 A G T C A G T C A C G T A C T G C G T A G T C A C G T A A C T G T A G C C T A G A C T G G T C A T C A G
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCTGAMAGSGGMR
VBTGWCAGCB---
 A G T C A G T C A C G T A C T G C G T A G T C A C G T A A C T G T A G C C T A G A C T G G T C A T C A G
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCTGAMAGSGGMR
-TTGACAG-----
 A G T C A G T C A C G T A C T G C G T A G T C A C G T A A C T G T A G C C T A G A C T G G T C A T C A G
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCTGAMAGSGGMR
-TTGACAGG----
 A G T C A G T C A C G T A C T G C G T A G T C A C G T A A C T G T A G C C T A G A C T G G T C A T C A G
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCTGAMAGSGGMR-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A G T C A G T C A C G T A C T G C G T A G T C A C G T A A C T G T A G C C T A G A C T G G T C A T C A G A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCTGAMAGSGGMR-
GATATTGACAGCTGCGT
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G C G T A G T C A C G T A A C T G T A G C C T A G A C T G G T C A T C A G A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTGAMAGSGGMR
ACTGAAACCA---
 A G T C A G T C A C G T A C T G C G T A G T C A C G T A A C T G T A G C C T A G A C T G G T C A T C A G
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCTGAMAGSGGMR-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A G T C A G T C A C G T A C T G C G T A G T C A C G T A A C T G T A G C C T A G A C T G G T C A T C A G A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCTGAMAGSGGMR
GGTGYTGACAGS----
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G C G T A G T C A C G T A A C T G T A G C C T A G A C T G G T C A T C A G
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCTGAMAGSGGMR
RHTGWCAR-----
 A G T C A G T C A C G T A C T G C G T A G T C A C G T A A C T G T A G C C T A G A C T G G T C A T C A G
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T