Information for 5-CAGCCGGACAGAG (Motif 6)

A G T C G T C A A C T G A G T C A G T C C T A G A C T G C G T A A G T C C G T A C T A G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C A C T G C T A G A G T C A C G T A C T G
p-value:1e-10
log p-value:-2.512e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.2 +/- 29.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CAGCCGGACAGAG
---CCAGACAG--
 A G T C G T C A A C T G A G T C A G T C C T A G A C T G C G T A A G T C C G T A C T A G C G T A A C T G
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CAGCCGGACAGAG-
----GGAACAAAGR
 A G T C G T C A A C T G A G T C A G T C C T A G A C T G C G T A A G T C C G T A C T A G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGCCGGACAGAG--
CAAATCCAGACATCACA
 A C G T A C G T A G T C G T C A A C T G A G T C A G T C C T A G A C T G C G T A A G T C C G T A C T A G C G T A A C T G A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CAGCCGGACAGAG-
----VRRACAAWGG
 A G T C G T C A A C T G A G T C A G T C C T A G A C T G C G T A A G T C C G T A C T A G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGCCGGACAGAG----
-AAACAGACAAAGGAAT
 A G T C G T C A A C T G A G T C A G T C C T A G A C T G C G T A A G T C C G T A C T A G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CAGCCGGACAGAG
-------ACAAAG
 A G T C G T C A A C T G A G T C A G T C C T A G A C T G C G T A A G T C C G T A C T A G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CAGCCGGACAGAG-
----AAAACAAAGG
 A G T C G T C A A C T G A G T C A G T C C T A G A C T G C G T A A G T C C G T A C T A G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCGGACAGAG
GAGCACAGCAGGACA---
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G A G T C A G T C C T A G A C T G C G T A A G T C C G T A C T A G C G T A A C T G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAGCCGGACAGAG
---CCAGACRSVB
 A G T C G T C A A C T G A G T C A G T C C T A G A C T G C G T A A G T C C G T A C T A G C G T A A C T G
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCGGACAGAG
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G A G T C A G T C C T A G A C T G C G T A A G T C C G T A C T A G C G T A A C T G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T