Information for 1-CATGGGCAACTGGCGT (Motif 5)

G T A C T C G A C G A T C T A G A C T G A C T G A G T C G T C A C T G A T G A C C A G T C T A G C T A G A G T C T A C G A C G T
Reverse Opposite:
T C G A A G T C C T A G A G T C A G T C G T C A A C T G G A C T A C G T A C T G A G T C A G T C A G T C C G T A A C G T A C T G
p-value:1e-11
log p-value:-2.651e+01
Information Content per bp:1.704
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.3 +/- 20.2bp
Average Position of motif in Background51.2 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CATGGGCAACTGGCGT
NGTGGGCAT-------
 G T A C T C G A C G A T C T A G A C T G A C T G A G T C G T C A C T G A T G A C C A G T C T A G C T A G A G T C T A C G A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CATGGGCAACTGGCGT
TNNGGGCAG-------
 G T A C T C G A C G A T C T A G A C T G A C T G A G T C G T C A C T G A T G A C C A G T C T A G C T A G A G T C T A C G A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CATGGGCAACTGGCGT
NNNNTTGGGCACNNCN---
 A C G T A C G T A C G T G T A C T C G A C G A T C T A G A C T G A C T G A G T C G T C A C T G A T G A C C A G T C T A G C T A G A G T C T A C G A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATGGGCAACTGGCGT
WDNCTGGGCA--------
 A C G T A C G T G T A C T C G A C G A T C T A G A C T G A C T G A G T C G T C A C T G A T G A C C A G T C T A G C T A G A G T C T A C G A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CATGGGCAACTGGCGT
----GCCAGCTGBTNB
 G T A C T C G A C G A T C T A G A C T G A C T G A G T C G T C A C T G A T G A C C A G T C T A G C T A G A G T C T A C G A C G T
A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CATGGGCAACTGGCGT
NNTTGGCANN------
 G T A C T C G A C G A T C T A G A C T G A C T G A G T C G T C A C T G A T G A C C A G T C T A G C T A G A G T C T A C G A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CATGGGCAACTGGCGT
-TAGGGCAAAGGTCA-
 G T A C T C G A C G A T C T A G A C T G A C T G A G T C G T C A C T G A T G A C C A G T C T A G C T A G A G T C T A C G A C G T
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CATGGGCAACTGGCGT
----NVCAGCTGBBNN
 G T A C T C G A C G A T C T A G A C T G A C T G A G T C G T C A C T G A T G A C C A G T C T A G C T A G A G T C T A C G A C G T
A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CATGGGCAACTGGCGT
-NTTGGCANN------
 G T A C T C G A C G A T C T A G A C T G A C T G A G T C G T C A C T G A T G A C C A G T C T A G C T A G A G T C T A C G A C G T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CATGGGCAACTGGCGT
CSTGGGAAAD------
 G T A C T C G A C G A T C T A G A C T G A C T G A G T C G T C A C T G A T G A C C A G T C T A G C T A G A G T C T A C G A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T