Information for 5-VGTGGAHCCTTGAGGC (Motif 21)

T C G A A C T G C G A T A C T G A C T G G T C A G C T A G T A C A G T C A G C T A C G T T A C G T C G A A C T G A C T G G T A C
Reverse Opposite:
A C T G G T A C A G T C A G C T A T G C G T C A C T G A C T A G A C T G C A G T A C G T A G T C A G T C C G T A A G T C A C G T
p-value:1e-8
log p-value:-1.944e+01
Information Content per bp:1.765
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 19.1bp
Average Position of motif in Background83.3 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:VGTGGAHCCTTGAGGC
-GTGGAT---------
 T C G A A C T G C G A T A C T G A C T G G T C A G C T A G T A C A G T C A G C T A C G T T A C G T C G A A C T G A C T G G T A C
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:VGTGGAHCCTTGAGGC
AATGGAAAAT------
 T C G A A C T G C G A T A C T G A C T G G T C A G C T A G T A C A G T C A G C T A C G T T A C G T C G A A C T G A C T G G T A C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:VGTGGAHCCTTGAGGC-
------NGCCTGAGGCN
 T C G A A C T G C G A T A C T G A C T G G T C A G C T A G T A C A G T C A G C T A C G T T A C G T C G A A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:VGTGGAHCCTTGAGGC-
------NGCCTNAGGCN
 T C G A A C T G C G A T A C T G A C T G G T C A G C T A G T A C A G T C A G C T A C G T T A C G T C G A A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:forward strand
Alignment:VGTGGAHCCTTGAGGC--
---GGTCANYTGAGGWCA
 T C G A A C T G C G A T A C T G A C T G G T C A G C T A G T A C A G T C A G C T A C G T T A C G T C G A A C T G A C T G G T A C A C G T A C G T
A C G T A C G T A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:VGTGGAHCCTTGAGGC-
------TGCCTGAGGCN
 T C G A A C T G C G A T A C T G A C T G G T C A G C T A G T A C A G T C A G C T A C G T T A C G T C G A A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.49
Offset:7
Orientation:forward strand
Alignment:VGTGGAHCCTTGAGGC---
-------SCCTSAGGSCAW
 T C G A A C T G C G A T A C T G A C T G G T C A G C T A G T A C A G T C A G C T A C G T T A C G T C G A A C T G A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:VGTGGAHCCTTGAGGC
NNTGGAAANN------
 T C G A A C T G C G A T A C T G A C T G G T C A G C T A G T A C A G T C A G C T A C G T T A C G T C G A A C T G A C T G G T A C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:forward strand
Alignment:VGTGGAHCCTTGAGGC-
-----TGCCCCAGGGCA
 T C G A A C T G C G A T A C T G A C T G G T C A G C T A G T A C A G T C A G C T A C G T T A C G T C G A A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:forward strand
Alignment:VGTGGAHCCTTGAGGC-
-----TGCCCCCGGGCA
 T C G A A C T G C G A T A C T G A C T G G T C A G C T A G T A C A G T C A G C T A C G T T A C G T C G A A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A