Information for 10-GCAGSCATGGCTG (Motif 19)

C T A G A G T C C G T A A T C G A T G C G T A C G T C A A C G T A C T G A C T G A G T C A G C T A C T G
Reverse Opposite:
A G T C C T G A C T A G A G T C G T A C C G T A A C G T A C T G A T C G A T G C A C G T A C T G A G T C
p-value:1e-8
log p-value:-1.953e+01
Information Content per bp:1.825
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif29.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets50.4 +/- 21.8bp
Average Position of motif in Background49.2 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCAGSCATGGCTG-
GTCATGCHTGRCTGS
 A C G T C T A G A G T C C G T A A T C G A T G C G T A C G T C A A C G T A C T G A C T G A G T C A G C T A C T G A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCAGSCATGGCTG-
NGTCACGCTTGGCTGC
 A C G T A C G T C T A G A G T C C G T A A T C G A T G C G T A C G T C A A C G T A C T G A C T G A G T C A G C T A C T G A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCAGSCATGGCTG
--AGGCCTNG---
 C T A G A G T C C G T A A T C G A T G C G T A C G T C A A C G T A C T G A C T G A G T C A G C T A C T G
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.54
Offset:-9
Orientation:reverse strand
Alignment:---------GCAGSCATGGCTG---
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G T A A T C G A T G C G T A C G T C A A C G T A C T G A C T G A G T C A G C T A C T G A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCAGSCATGGCTG
AGGGAAGTCATTTCT-
 A C G T A C G T A C G T C T A G A G T C C G T A A T C G A T G C G T A C G T C A A C G T A C T G A C T G A G T C A G C T A C T G
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCAGSCATGGCTG--
-CAGGCCNNGGCCNN
 C T A G A G T C C G T A A T C G A T G C G T A C G T C A A C G T A C T G A C T G A G T C A G C T A C T G A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCAGSCATGGCTG
CACAGN--------
 A C G T C T A G A G T C C G T A A T C G A T G C G T A C G T C A A C G T A C T G A C T G A G T C A G C T A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCAGSCATGGCTG
CCWGGAATGY---
 C T A G A G T C C G T A A T C G A T G C G T A C G T C A A C G T A C T G A C T G A G T C A G C T A C T G
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCAGSCATGGCTG--
CGTCACGCATGACTGCA
 A C G T A C G T C T A G A G T C C G T A A T C G A T G C G T A C G T C A A C G T A C T G A C T G A G T C A G C T A C T G A C G T A C G T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

PAX5/MA0014.2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCAGSCATGGCTG-----
GTCACGCTTGGCTGCNCNN
 A C G T C T A G A G T C C G T A A T C G A T G C G T A C G T C A A C G T A C T G A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C