Information for 6-ACGGACAGGC (Motif 18)

G T C A G T A C T C A G T A C G G C T A G A T C G C T A A C T G A C T G T A G C
Reverse Opposite:
A T C G T G A C T G A C C G A T C T A G C G A T A T G C A G T C A C T G C A G T
p-value:1e-8
log p-value:-1.955e+01
Information Content per bp:1.663
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif9.39%
Number of Background Sequences with motif2206.6
Percentage of Background Sequences with motif4.58%
Average Position of motif in Targets45.7 +/- 26.0bp
Average Position of motif in Background49.2 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACGGACAGGC
TGAGTGACAGSC
 A C G T A C G T G T C A G T A C T C A G T A C G G C T A G A T C G C T A A C T G A C T G T A G C
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ACGGACAGGC
---CACAGN-
 G T C A G T A C T C A G T A C G G C T A G A T C G C T A A C T G A C T G T A G C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACGGACAGGC----
NNATTGACAGGTGCTT
 A C G T A C G T G T C A G T A C T C A G T A C G G C T A G A T C G C T A A C T G A C T G T A G C A C G T A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACGGACAGGC
-TTGACAGC-
 G T C A G T A C T C A G T A C G G C T A G A T C G C T A A C T G A C T G T A G C
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACGGACAGGC
CCAGGAACAG--
 A C G T A C G T G T C A G T A C T C A G T A C G G C T A G A T C G C T A A C T G A C T G T A G C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACGGACAGGC-----
AGCAACAGCCGCACC
 G T C A G T A C T C A G T A C G G C T A G A T C G C T A A C T G A C T G T A G C A C G T A C G T A C G T A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACGGACAGGC
VBTGWCAGCB
 G T C A G T A C T C A G T A C G G C T A G A T C G C T A A C T G A C T G T A G C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACGGACAGGC
NTGATTGACAGN-
 A C G T A C G T A C G T G T C A G T A C T C A G T A C G G C T A G A T C G C T A A C T G A C T G T A G C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACGGACAGGC
-TTGACAGG-
 G T C A G T A C T C A G T A C G G C T A G A T C G C T A A C T G A C T G T A G C
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACGGACAGGC
-TTGACAG--
 G T C A G T A C T C A G T A C G G C T A G A T C G C T A A C T G A C T G T A G C
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T