Information for 5-TAAATCTGTC (Motif 17)

A C G T C G T A C G T A C T G A A C G T A G T C A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C G T A A C T G C G T A A G C T A C G T A C G T C G T A
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.962
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.8 +/- 26.5bp
Average Position of motif in Background40.0 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9/MA0485.1/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TAAATCTGTC
GGCCATAAATCAC--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A A C G T A G T C A C G T A C T G A C G T A G T C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TAAATCTGTC--
-----NTGTCAN
 A C G T C G T A C G T A C T G A A C G T A G T C A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TAAATCTGTC
CAAATCACTG
 A C G T C G T A C G T A C T G A A C G T A G T C A C G T A C T G A C G T A G T C
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TAAATCTGTC
GGCCATAAATCA---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A A C G T A G T C A C G T A C T G A C G T A G T C
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TAAATCTGTC--
----GCTGTCAA
 A C G T C G T A C G T A C T G A A C G T A G T C A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TAAATCTGTC
GGCCATAAATCA---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A A C G T A G T C A C G T A C T G A C G T A G T C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TAAATCTGTC--
----CCTGTCAA
 A C G T C G T A C G T A C T G A A C G T A G T C A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

Hoxa9/MA0594.1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TAAATCTGTC
GCCATAAATCA---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A A C G T A G T C A C G T A C T G A C G T A G T C
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TAAATCTGTC
----GCTGTG
 A C G T C G T A C G T A C T G A A C G T A G T C A C G T A C T G A C G T A G T C
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TAAATCTGTC-----
AAAGACCTGTCAATAC
 A C G T A C G T C G T A C G T A C T G A A C G T A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C