Information for 4-CCACTGTGAT (Motif 16)

T G A C A G T C C T G A A T G C G C A T A C T G A C G T T A C G G T C A G C A T
Reverse Opposite:
C G T A C A G T A T G C T G C A T G A C C G T A T A C G G A C T T C A G A C T G
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.666
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.33%
Number of Background Sequences with motif651.9
Percentage of Background Sequences with motif1.35%
Average Position of motif in Targets47.1 +/- 27.2bp
Average Position of motif in Background49.8 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCACTGTGAT---
---CNGTGATTTN
 T G A C A G T C C T G A A T G C G C A T A C T G A C G T T A C G G T C A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCACTGTGAT---
CAATCACTGGCAGAAT
 A C G T A C G T A C G T T G A C A G T C C T G A A T G C G C A T A C T G A C G T T A C G G T C A G C A T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCACTGTGAT
--GCTGTG--
 T G A C A G T C C T G A A T G C G C A T A C T G A C G T T A C G G T C A G C A T
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCACTGTGAT
CTCATTGTC--
 A C G T T G A C A G T C C T G A A T G C G C A T A C T G A C G T T A C G G T C A G C A T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCACTGTGAT--
-TGCTGTGATTT
 T G A C A G T C C T G A A T G C G C A T A C T G A C G T T A C G G T C A G C A T A C G T A C G T
A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCACTGTGAT
CCTTTGTT--
 T G A C A G T C C T G A A T G C G C A T A C T G A C G T T A C G G T C A G C A T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCACTGTGAT--
--GCAGTGATTT
 T G A C A G T C C T G A A T G C G C A T A C T G A C G T T A C G G T C A G C A T A C G T A C G T
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCACTGTGAT--
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A C G T A C G T T G A C A G T C C T G A A T G C G C A T A C T G A C G T T A C G G T C A G C A T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCACTGTGAT
CCATTGTTYB
 T G A C A G T C C T G A A T G C G C A T A C T G A C G T T A C G G T C A G C A T
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCACTGTGAT-
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A C G T T G A C A G T C C T G A A T G C G C A T A C T G A C G T T A C G G T C A G C A T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C