Information for 9-CCACTTCTGTCTG (Motif 15)

A T G C G T A C C G T A A G T C A C G T A G C T A G T C C G A T A T C G A C G T A T G C A C G T A C T G
Reverse Opposite:
A G T C C G T A A T C G T C G A A T G C C G T A A C T G C T G A C G T A C T A G C G A T A C T G A T C G
p-value:1e-9
log p-value:-2.107e+01
Information Content per bp:1.823
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif45.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets35.5 +/- 21.8bp
Average Position of motif in Background54.0 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.65
Offset:6
Orientation:forward strand
Alignment:CCACTTCTGTCTG-
------CTGTCTGG
 A T G C G T A C C G T A A G T C A C G T A G C T A G T C C G A T A T C G A C G T A T G C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCACTTCTGTCTG------
--NNTNNTGTCTGGNNTNG
 A T G C G T A C C G T A A G T C A C G T A G C T A G T C C G A T A T C G A C G T A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CCACTTCTGTCTG-
----VBSYGTCTGG
 A T G C G T A C C G T A A G T C A C G T A G C T A G T C C G A T A T C G A C G T A T G C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CCACTTCTGTCTG-
------TWGTCTGV
 A T G C G T A C C G T A A G T C A C G T A G C T A G T C C G A T A T C G A C G T A T G C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCACTTCTGTCTG
RSCACTYRAG----
 A C G T A T G C G T A C C G T A A G T C A C G T A G C T A G T C C G A T A T C G A C G T A T G C A C G T A C T G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCACTTCTGTCTG
CCACTTGAA----
 A T G C G T A C C G T A A G T C A C G T A G C T A G T C C G A T A T C G A C G T A T G C A C G T A C T G
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCACTTCTGTCTG-----
--ANTCCTTTGTCTNNNN
 A T G C G T A C C G T A A G T C A C G T A G C T A G T C C G A T A T C G A C G T A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCACTTCTGTCTG
ACCACTTGAA----
 A C G T A T G C G T A C C G T A A G T C A C G T A G C T A G T C C G A T A T C G A C G T A T G C A C G T A C T G
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCACTTCTGTCTG
--ACTTCCTBGT-
 A T G C G T A C C G T A A G T C A C G T A G C T A G T C C G A T A T C G A C G T A T G C A C G T A C T G
A C G T A C G T T C G A A G T C A G C T C G A T A G T C A T G C A C G T A T G C T C A G C G A T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCACTTCTGTCTG
AASCACTCAA-----
 A C G T A C G T A T G C G T A C C G T A A G T C A C G T A G C T A G T C C G A T A T C G A C G T A T G C A C G T A C T G
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T