Information for 3-ACAAAGCCCT (Motif 13)

G C T A T G A C G C T A C G T A C G T A A T C G G T A C A T G C A G T C C G A T
Reverse Opposite:
C G T A A C T G A T C G A C T G A T G C A C G T G C A T C G A T A C T G C G A T
p-value:1e-9
log p-value:-2.262e+01
Information Content per bp:1.840
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif126.0
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets53.3 +/- 25.1bp
Average Position of motif in Background53.0 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACAAAGCCCT
ACAAAG----
 G C T A T G A C G C T A C G T A C G T A A T C G G T A C A T G C A G T C C G A T
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACAAAGCCCT--
ACAAAGGNBCCT
 G C T A T G A C G C T A C G T A C G T A A T C G G T A C A T G C A G T C C G A T A C G T A C G T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGCCCT
VRRACAAWGG---
 A C G T A C G T A C G T G C T A T G A C G C T A C G T A C G T A A T C G G T A C A T G C A G T C C G A T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGCCCT
GGAACAAAGR---
 A C G T A C G T A C G T G C T A T G A C G C T A C G T A C G T A A T C G G T A C A T G C A G T C C G A T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------ACAAAGCCCT-
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A T G A C G C T A C G T A C G T A A T C G G T A C A T G C A G T C C G A T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGCCCT
AAAACAAAGG---
 A C G T A C G T A C G T G C T A T G A C G C T A C G T A C G T A A T C G G T A C A T G C A G T C C G A T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAGCCCT
RACAAWGG---
 A C G T G C T A T G A C G C T A C G T A C G T A A T C G G T A C A T G C A G T C C G A T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------ACAAAGCCCT-
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A T G A C G C T A C G T A C G T A A T C G G T A C A T G C A G T C C G A T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ACAAAGCCCT
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T G C T A T G A C G C T A C G T A C G T A A T C G G T A C A T G C A G T C C G A T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ACAAAGCCCT
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A T G A C G C T A C G T A C G T A A T C G G T A C A T G C A G T C C G A T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T