Information for 3-GCCGAGATCKCGGCCT (Motif 10)

A C T G A G T C A G T C A C T G G T C A A C T G G T C A A C G T A G T C A C G T A G T C A C T G A C T G A G T C A T G C A G C T
Reverse Opposite:
C T G A A T C G C T A G G T A C A G T C A C T G T G A C A C T G C G T A A C G T A G T C A C G T A G T C A C T G C T A G A G T C
p-value:1e-10
log p-value:-2.512e+01
Information Content per bp:1.827
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.3 +/- 16.4bp
Average Position of motif in Background33.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0127.1_Gata6_2/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCGAGATCKCGGCCT
NGCTGCGATATCGNCGC
 A C G T A C T G A G T C A G T C A C T G G T C A A C T G G T C A A C G T A G T C A C G T A G T C A C T G A C T G A G T C A T G C A G C T
G T A C C T A G T A G C A C G T T A C G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A G T C T A G C T A C G G T A C

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GCCGAGATCKCGGCCT
-----GGTCCCGCCC-
 A C T G A G T C A G T C A C T G G T C A A C T G G T C A A C G T A G T C A C G T A G T C A C T G A C T G A G T C A T G C A G C T
A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCCGAGATCKCGGCCT
--CAAGATGGCGGC--
 A C T G A G T C A G T C A C T G G T C A A C T G G T C A A C G T A G T C A C G T A G T C A C T G A C T G A G T C A T G C A G C T
A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCCGAGATCKCGGCCT-
--ACCACTCTCGGTCAC
 A C T G A G T C A G T C A C T G G T C A A C T G G T C A A C G T A G T C A C G T A G T C A C T G A C T G A G T C A T G C A G C T A C G T
A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCCGAGATCKCGGCCT-
---GGGGCCGAGGCCTG
 A C T G A G T C A G T C A C T G G T C A A C T G G T C A A C G T A G T C A C G T A G T C A C T G A C T G A G T C A T G C A G C T A C G T
A C G T A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GCCGAGATCKCGGCCT-
--AGTATTCTCGGTTGC
 A C T G A G T C A G T C A C T G G T C A A C T G G T C A A C G T A G T C A C G T A G T C A C T G A C T G A G T C A T G C A G C T A C G T
A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCCGAGATCKCGGCCT-
--NNAATTCTCGNTNAN
 A C T G A G T C A G T C A C T G G T C A A C T G G T C A A C G T A G T C A C G T A G T C A C T G A C T G A G T C A T G C A G C T A C G T
A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GCCGAGATCKCGGCCT
NNNCTGATATCTCNNNN-
 A C G T A C G T A C T G A G T C A G T C A C T G G T C A A C T G G T C A A C G T A G T C A C G T A G T C A C T G A C T G A G T C A T G C A G C T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:GCCGAGATCKCGGCCT
--------CTAGGCCT
 A C T G A G T C A G T C A C T G G T C A A C T G G T C A A C G T A G T C A C G T A G T C A C T G A C T G A G T C A T G C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

ZBED1/MA0749.1/Jaspar

Match Rank:10
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---GCCGAGATCKCGGCCT
TATGTCGCGATAG------
 A C G T A C G T A C G T A C T G A G T C A G T C A C T G G T C A A C T G G T C A A C G T A G T C A C G T A G T C A C T G A C T G A G T C A T G C A G C T
G A C T T G C A C G A T C T A G A G C T A G T C C T A G A G T C T C A G C T G A A G C T G C T A C A T G A C G T A C G T A C G T A C G T A C G T A C G T