Information for 22-GTTYSCAGCMTRC (Motif 36)

A C T G A C G T A C G T A G C T A T G C G T A C C G T A A C T G A G T C G T C A A C G T C T G A A G T C
Reverse Opposite:
A C T G A G C T C G T A A C G T A C T G A G T C A C G T A C T G A T C G C T G A C G T A C G T A A G T C
p-value:1e-6
log p-value:-1.519e+01
Information Content per bp:1.876
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.8 +/- 13.7bp
Average Position of motif in Background41.7 +/- 7.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTTYSCAGCMTRC-
ATTTCCCAGVAKSCY
 A C G T A C T G A C G T A C G T A G C T A T G C G T A C C G T A A C T G A G T C G T C A A C G T C T G A A G T C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GTTYSCAGCMTRC
-----CAGCC---
 A C T G A C G T A C G T A G C T A T G C G T A C C G T A A C T G A G T C G T C A A C G T C T G A A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTTYSCAGCMTRC
-TTMACACCTT--
 A C T G A C G T A C G T A G C T A T G C G T A C C G T A A C T G A G T C G T C A A C G T C T G A A G T C
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTTYSCAGCMTRC-
KGTTGCTAGGMAACA
 A C G T A C T G A C G T A C G T A G C T A T G C G T A C C G T A A C T G A G T C G T C A A C G T C T G A A G T C A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTTYSCAGCMTRC--
GAGCACAGCAGGACA
 A C T G A C G T A C G T A G C T A T G C G T A C C G T A A C T G A G T C G T C A A C G T C T G A A G T C A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTTYSCAGCMTRC
-TGCCCAGNHW--
 A C T G A C G T A C G T A G C T A T G C G T A C C G T A A C T G A G T C G T C A A C G T C T G A A G T C
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTTYSCAGCMTRC--
CCACACAGCAGGAGA
 A C T G A C G T A C G T A G C T A T G C G T A C C G T A A C T G A G T C G T C A A C G T C T G A A G T C A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTTYSCAGCMTRC
HTTTCCCASG----
 A C G T A C T G A C G T A C G T A G C T A T G C G T A C C G T A A C T G A G T C G T C A A C G T C T G A A G T C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GTTYSCAGCMTRC
--DCTCAGCAGG-
 A C T G A C G T A C G T A G C T A T G C G T A C C G T A A C T G A G T C G T C A A C G T C T G A A G T C
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GTTYSCAGCMTRC-
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C T G A C G T A C G T A G C T A T G C G T A C C G T A A C T G A G T C G T C A A C G T C T G A A G T C A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T