Information for 10-AAACACAATATACATA (Motif 24)

G T C A C G T A C G T A A T G C C G T A A T G C C T G A C G T A C G A T C G T A C G A T C T G A T A G C C G T A G A C T C G T A
Reverse Opposite:
C G A T C T G A A C G T A T C G A G C T C G T A A C G T C G T A A C G T G A C T A T C G A C G T T A C G C G A T G C A T A C G T
p-value:1e-9
log p-value:-2.105e+01
Information Content per bp:1.776
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.2 +/- 26.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AAACACAATATACATA
-----GAATATTCAT-
 G T C A C G T A C G T A A T G C C G T A A T G C C T G A C G T A C G A T C G T A C G A T C T G A T A G C C G T A G A C T C G T A
A C G T A C G T A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AAACACAATATACATA
-----GHATATKCAT-
 G T C A C G T A C G T A A T G C C G T A A T G C C T G A C G T A C G A T C G T A C G A T C T G A T A G C C G T A G A C T C G T A
A C G T A C G T A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AAACACAATATACATA
---GACAATGNN----
 G T C A C G T A C G T A A T G C C G T A A T G C C T G A C G T A C G A T C G T A C G A T C T G A T A G C C G T A G A C T C G T A
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AAACACAATATACATA----
----AAAGTAAACAAAAATT
 G T C A C G T A C G T A A T G C C G T A A T G C C T G A C G T A C G A T C G T A C G A T C T G A T A G C C G T A G A C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

PB0073.1_Sox7_1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AAACACAATATACATA--
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T G T C A C G T A C G T A A T G C C G T A A T G C C T G A C G T A C G A T C G T A C G A T C T G A T A G C C G T A G A C T C G T A A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:AAACACAATATACATA
-------ATTTGCATA
 G T C A C G T A C G T A A T G C C G T A A T G C C T G A C G T A C G A T C G T A C G A T C T G A T A G C C G T A G A C T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

POU3F4/MA0789.1/Jaspar

Match Rank:7
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:AAACACAATATACATA
-------ATTTGCATA
 G T C A C G T A C G T A A T G C C G T A A T G C C T G A C G T A C G A T C G T A C G A T C T G A T A G C C G T A G A C T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

POU2F1/MA0785.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AAACACAATATACATA--
------AATTTGCATANT
 G T C A C G T A C G T A A T G C C G T A A T G C C T G A C G T A C G A T C G T A C G A T C T G A T A G C C G T A G A C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AAACACAATATACATA-
-----TAATTTGCATAA
 G T C A C G T A C G T A A T G C C G T A A T G C C T G A C G T A C G A T C G T A C G A T C T G A T A G C C G T A G A C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

PB0074.1_Sox8_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AAACACAATATACATA
TNNAGAACAATANATNN-
 A C G T A C G T G T C A C G T A C G T A A T G C C G T A A T G C C T G A C G T A C G A T C G T A C G A T C T G A T A G C C G T A G A C T C G T A
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C A C G T