Information for 8-KRTGWSAATATTT (Motif 17)

A C T G C T A G A C G T A C T G C G T A A T G C C G T A G T C A A C G T C G T A C G A T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T C G T A A C G T A C G T A T C G C G A T A G T C C G T A A G T C G T A C
p-value:1e-9
log p-value:-2.165e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.6 +/- 34.1bp
Average Position of motif in Background22.4 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:KRTGWSAATATTT-
NNTNNCAATATTAG
 A C T G C T A G A C G T A C T G C G T A A T G C C G T A G T C A A C G T C G T A C G A T A C G T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:KRTGWSAATATTT-
NNTNNCAATATTAG
 A C T G C T A G A C G T A C T G C G T A A T G C C G T A G T C A A C G T C G T A C G A T A C G T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:KRTGWSAATATTT
TATGTAAATAT--
 A C T G C T A G A C G T A C T G C G T A A T G C C G T A G T C A A C G T C G T A C G A T A C G T A C G T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:KRTGWSAATATTT
TATGTAAATAT--
 A C T G C T A G A C G T A C T G C G T A A T G C C G T A G T C A A C G T C G T A C G A T A C G T A C G T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.64
Offset:6
Orientation:forward strand
Alignment:KRTGWSAATATTT
------AATAATT
 A C T G C T A G A C G T A C T G C G T A A T G C C G T A G T C A A C G T C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-KRTGWSAATATTT
AGGTGTTAAT----
 A C G T A C T G C T A G A C G T A C T G C G T A A T G C C G T A G T C A A C G T C G T A C G A T A C G T A C G T
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----KRTGWSAATATTT
GAAAAGGTGTGAAAATT-
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C G T A C T G C G T A A T G C C G T A G T C A A C G T C G T A C G A T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:KRTGWSAATATTT
RHTGWCAR-----
 A C T G C T A G A C G T A C T G C G T A A T G C C G T A G T C A A C G T C G T A C G A T A C G T A C G T
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-KRTGWSAATATTT
AGGTGTGAAM----
 A C G T A C T G C T A G A C G T A C T G C G T A A T G C C G T A G T C A A C G T C G T A C G A T A C G T A C G T
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-KRTGWSAATATTT---
ATGGTTCAATAATTTTG
 A C G T A C T G C T A G A C G T A C T G C G T A A T G C C G T A G T C A A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G